DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3909 and Wdr72

DIOPT Version :9

Sequence 1:NP_649969.1 Gene:CG3909 / 41226 FlyBaseID:FBgn0027524 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001028672.2 Gene:Wdr72 / 546144 MGIID:3583957 Length:1114 Species:Mus musculus


Alignment Length:280 Identity:64/280 - (22%)
Similarity:111/280 - (39%) Gaps:69/280 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LRHKLKGHAL--------GVVSVAVSSDGQTIASSSLDSTMCLWDARSGDK---KHLLSFGPVDL 130
            :|..|:..||        .:.::.::.|.|||.:.|.:..:|||......|   |.|| ||....
Mouse     1 MRGALQAVALWGRKAPPHSITAIMITDDQQTIVTGSQEGQLCLWSLSPELKISAKELL-FGHSAS 64

  Fly   131 WTV-----QFSPCNKYVISGLNDGKISMYSVETGK-AEQT-LDAQNGK---YTLSIAYSPDGKYI 185
            .|.     .||. ..||:|...:|::.|::|.:|: .|:| |..::..   |..|...:.:|..:
Mouse    65 VTCLARARDFSK-QPYVVSAAENGEMCMWNVSSGQCVEKTSLPYRHTAICYYHCSFRMTGEGWLL 128

  Fly   186 ASGAIDGIITIFDVAAGKVVQTLEGHAMP--VRSLCFSPNSQL----LLTASDDGHMKLYDVTHS 244
            ..|....:: :.|.....|:.|......|  ::.:|...:.::    ||..|..|.:|::|:   
Mouse   129 CCGEYQDVL-VLDAGTLAVLHTFTSLQSPDWMKCMCIVHSVRIQEDSLLVVSITGELKVWDL--- 189

  Fly   245 DVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSV-KIWDTSER--KCLHTFAEHTDQVWGVRYSP 306
                                       |||.||: :..|..|:  |.|.:|...|     :|:.|
Mouse   190 ---------------------------SSSINSIQEKQDVHEKESKFLDSFNCQT-----IRFCP 222

  Fly   307 GNDKVASASEDKSLNIY-YC 325
            ..:::......|...|| ||
Mouse   223 YTERLLLVVFSKCWKIYDYC 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3909NP_649969.1 WD40 52..323 CDD:238121 60/275 (22%)
WD40 <54..326 CDD:225201 64/280 (23%)
WD40 repeat 89..127 CDD:293791 13/40 (33%)
WD40 repeat 130..166 CDD:293791 12/42 (29%)
WD40 repeat 174..209 CDD:293791 6/34 (18%)
WD40 repeat 215..251 CDD:293791 7/39 (18%)
WD40 repeat 257..293 CDD:293791 9/38 (24%)
WD40 repeat 299..323 CDD:293791 3/23 (13%)
Wdr72NP_001028672.2 WD40 14..>191 CDD:392136 42/209 (20%)
WD 1. /evidence=ECO:0000255 15..54 9/38 (24%)
WD40 repeat 20..60 CDD:293791 12/40 (30%)
WD 2. /evidence=ECO:0000255 60..102 11/42 (26%)
WD40 repeat 66..107 CDD:293791 13/41 (32%)
WD40 repeat 112..151 CDD:293791 7/39 (18%)
WD40 repeat 160..206 CDD:293791 14/75 (19%)
WD 3. /evidence=ECO:0000255 160..197 12/66 (18%)
WD 4. /evidence=ECO:0000255 327..373
WD 5. /evidence=ECO:0000255 413..452
WD40 418..>606 CDD:392136
WD40 repeat 419..470 CDD:293791
WD 6. /evidence=ECO:0000255 470..515
WD40 repeat 475..516 CDD:293791
WD 7. /evidence=ECO:0000255 566..605
WD40 repeat 571..597 CDD:293791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 634..658
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 749..798
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4155
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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