Sequence 1: | NP_649969.1 | Gene: | CG3909 / 41226 | FlyBaseID: | FBgn0027524 | Length: | 331 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012815297.2 | Gene: | apaf1 / 100127738 | XenbaseID: | XB-GENE-988968 | Length: | 1248 | Species: | Xenopus tropicalis |
Alignment Length: | 471 | Identity: | 96/471 - (20%) |
---|---|---|---|
Similarity: | 162/471 - (34%) | Gaps: | 166/471 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 EENAHDSQLWACTWGRD-----TAASDPDDAV---------------VEPEENPFDFDKKEARPK 52
Fly 53 DFLVTGGLDDLVKVWDLQED---NTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Fly 115 RSGDKKH---------------------------------------------------------- 121
Fly 122 ----------------LLSFGPVDLW-------------------TVQFSPCNKYVISGLNDGKI 151
Fly 152 SMYSVE----------------TGKAEQTLDAQNGK------------YTLS-----------IA 177
Fly 178 YSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVT 242
Fly 243 HSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPG 307
Fly 308 NDKVASASEDKSLNIY 323 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3909 | NP_649969.1 | WD40 | 52..323 | CDD:238121 | 83/405 (20%) |
WD40 | <54..326 | CDD:225201 | 84/405 (21%) | ||
WD40 repeat | 89..127 | CDD:293791 | 12/111 (11%) | ||
WD40 repeat | 130..166 | CDD:293791 | 10/70 (14%) | ||
WD40 repeat | 174..209 | CDD:293791 | 11/45 (24%) | ||
WD40 repeat | 215..251 | CDD:293791 | 7/35 (20%) | ||
WD40 repeat | 257..293 | CDD:293791 | 9/35 (26%) | ||
WD40 repeat | 299..323 | CDD:293791 | 10/23 (43%) | ||
apaf1 | XP_012815297.2 | DD | 7..92 | CDD:417479 | |
NB-ARC | 131..374 | CDD:395745 | |||
APAF1_C | 453..587 | CDD:407760 | |||
WD40 | 610..906 | CDD:238121 | 44/262 (17%) | ||
WD40 repeat | 619..655 | CDD:293791 | 1/2 (50%) | ||
WD40 repeat | 660..697 | CDD:293791 | 4/36 (11%) | ||
WD40 repeat | 703..741 | CDD:293791 | 12/45 (27%) | ||
WD40 repeat | 746..788 | CDD:293791 | 11/41 (27%) | ||
WD40 repeat | 800..875 | CDD:293791 | 5/74 (7%) | ||
WD40 | 871..1203 | CDD:238121 | 57/243 (23%) | ||
WD40 repeat | 881..916 | CDD:293791 | 5/34 (15%) | ||
WD40 repeat | 921..957 | CDD:293791 | 8/35 (23%) | ||
WD40 repeat | 963..1000 | CDD:293791 | 10/36 (28%) | ||
WD40 repeat | 1006..1041 | CDD:293791 | 7/35 (20%) | ||
WD40 repeat | 1046..1080 | CDD:293791 | 9/34 (26%) | ||
WD40 repeat | 1088..1123 | CDD:293791 | 10/24 (42%) | ||
WD40 repeat | 1129..1170 | CDD:293791 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |