DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mical and WLIM1

DIOPT Version :9

Sequence 1:NP_001247015.1 Gene:Mical / 41225 FlyBaseID:FBgn0053208 Length:4743 Species:Drosophila melanogaster
Sequence 2:NP_172491.1 Gene:WLIM1 / 837558 AraportID:AT1G10200 Length:190 Species:Arabidopsis thaliana


Alignment Length:111 Identity:37/111 - (33%)
Similarity:49/111 - (44%) Gaps:13/111 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1086 LAFKKQAASEKCRFCKQTVYLMEKTTVEGLVLHRNCLKCHHCHTNLRLGGYAFDRDDPQGRFYCT 1150
            :||  ...::||..|.:||||::|.|.:..|.|:.|.:||||...|:|..|    :..:|..||.
plant     1 MAF--AGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNY----NSFEGVLYCR 59

  Fly  1151 QHFRLPPKPLPQRTNKARKSAAAQP--ASPAVPPTAGSVPTAAATS 1194
            .||....|    ||....||....|  ..|. .|..|..|.....|
plant    60 PHFDQNFK----RTGSLEKSFEGTPKIGKPD-RPLEGERPAGTKVS 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MicalNP_001247015.1 MDR <114..>160 CDD:302572
CH 563..>629 CDD:294029
LIM_Mical 1097..1153 CDD:188823 21/55 (38%)
Ehrlichia_rpt <2081..2479 CDD:118064
DUF3585 4592..4705 CDD:288945
WLIM1NP_172491.1 LIM1_SF3 6..68 CDD:188824 25/69 (36%)
LIM2_SF3 110..170 CDD:188825
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 56 1.000 Domainoid score I4039
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2983
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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