DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mical and PLIM2a

DIOPT Version :10

Sequence 1:NP_001247015.1 Gene:Mical / 41225 FlyBaseID:FBgn0053208 Length:4743 Species:Drosophila melanogaster
Sequence 2:NP_182104.1 Gene:PLIM2a / 819188 AraportID:AT2G45800 Length:226 Species:Arabidopsis thaliana


Alignment Length:191 Identity:49/191 - (25%)
Similarity:76/191 - (39%) Gaps:40/191 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1047 AGQFGKKDEANSDEKNAGSSNATTNTNNTVIPKSSSKVALAFKKQAASEKCRFCKQTVYLMEKTT 1111
            :|.:.|..:|...||           .|..:.::.||::..|  ....:||..||:|||.:||.|
plant    69 SGNYSKNFQAGKTEK-----------PNDHLTRTPSKLSSFF--SGTQDKCATCKKTVYPLEKVT 120

  Fly  1112 VEGLVLHRNCLKCHHCHTNLRLGGYAFDRDDPQGRFYCTQHF------RLPPKPLPQRTNKARKS 1170
            :||...|:.|.:|.|....|....||    ...|..||..||      :.....:.|.....|:|
plant   121 MEGESYHKTCFRCTHSGCPLTHSSYA----SLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRS 181

  Fly  1171 AAAQPASPAVPPTAGSVPTAAATSEHMDTTPPRDQVDLLETSRANASADAMSDDEANVIDE 1231
            |::..|||         |:        |...|.|...:.|....:|:.:|..::|...:.|
plant   182 ASSGGASP---------PS--------DDHKPDDTASIPEAKEDDAAPEAAGEEEPEPVVE 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MicalNP_001247015.1 UbiH 128..>263 CDD:440419
CH_SF 567..669 CDD:469584
LIM_Mical 1097..1153 CDD:188823 21/55 (38%)
PRK10819 <1450..>1557 CDD:236768
bMERB_dom 4592..4705 CDD:463467
PLIM2aNP_182104.1 LIM1_SF3 6..68 CDD:188824
LIM 106..166 CDD:413332 23/63 (37%)
Blue background indicates that the domain is not in the aligned region.

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