DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mical and crip3

DIOPT Version :9

Sequence 1:NP_001247015.1 Gene:Mical / 41225 FlyBaseID:FBgn0053208 Length:4743 Species:Drosophila melanogaster
Sequence 2:XP_021323078.1 Gene:crip3 / 556515 ZFINID:ZDB-GENE-130530-620 Length:213 Species:Danio rerio


Alignment Length:120 Identity:35/120 - (29%)
Similarity:47/120 - (39%) Gaps:25/120 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1097 CRFCKQTVYLMEKTTVEGLVLHRNCLKCHHCHTNLRLGGYAFDRDDPQGRFYCTQHFRLPPKPL- 1160
            |..|.:||:..||.:..|...||.||||..|...|..||:|    :..|..||  |     ||. 
Zfish     5 CPRCDKTVFFAEKVSSLGKNWHRFCLKCERCSKILSPGGHA----EHDGLPYC--H-----KPCY 58

  Fly  1161 -----PQRTNKARKSAAAQPASPAVP-------PTAGSVPTAAATSEHMDTTPPR 1203
                 |:..|.....:......|..|       |:.|| ||...|:..::...|:
Zfish    59 GTLFGPKGVNIGGAGSYIYDTPPQTPVNKTCNSPSEGS-PTTPWTTSQINFNQPK 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MicalNP_001247015.1 MDR <114..>160 CDD:302572
CH 563..>629 CDD:294029
LIM_Mical 1097..1153 CDD:188823 21/55 (38%)
Ehrlichia_rpt <2081..2479 CDD:118064
DUF3585 4592..4705 CDD:288945
crip3XP_021323078.1 LIM1_TLP 5..58 CDD:188860 24/63 (38%)
LIM2_TLP 128..181 CDD:188861
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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