DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mical and crip2

DIOPT Version :10

Sequence 1:NP_001247015.1 Gene:Mical / 41225 FlyBaseID:FBgn0053208 Length:4743 Species:Drosophila melanogaster
Sequence 2:NP_998662.2 Gene:crip2 / 554826 ZFINID:ZDB-GENE-040426-2889 Length:206 Species:Danio rerio


Alignment Length:118 Identity:37/118 - (31%)
Similarity:50/118 - (42%) Gaps:20/118 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1094 SEKCRFCKQTVYLMEKTTVEGLVLHRNCLKCHHCHTNLRLGGYAFDRDDPQGRFYCTQHFRLPPK 1158
            :.||..|::|||..||.:..|...|:.||||..|...|..||:|    :..|:.||  |     |
Zfish     2 ASKCPKCEKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTAGGHA----EHDGKPYC--H-----K 55

  Fly  1159 PL------PQRTN--KARKSAAAQPASPAVPPTAG-SVPTAAATSEHMDTTPP 1202
            |.      |:..|  .|.......|.:.:.||..| |.|.|......:.:.||
Zfish    56 PCYAALFGPKGVNIGGAGSYVYEAPTNTSPPPNNGDSAPKAQEKWVPVSSRPP 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MicalNP_001247015.1 UbiH 128..>263 CDD:440419
CH_SF 567..669 CDD:469584
LIM_Mical 1097..1153 CDD:188823 21/55 (38%)
PRK10819 <1450..>1557 CDD:236768
bMERB_dom 4592..4705 CDD:463467
crip2NP_998662.2 LIM1_TLP 5..58 CDD:188860 24/63 (38%)
LIM_TLP_like 124..177 CDD:188785
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.