DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mical and crip2l

DIOPT Version :10

Sequence 1:NP_001247015.1 Gene:Mical / 41225 FlyBaseID:FBgn0053208 Length:4743 Species:Drosophila melanogaster
Sequence 2:NP_001005968.1 Gene:crip2l / 449795 ZFINID:ZDB-GENE-041010-43 Length:202 Species:Danio rerio


Alignment Length:158 Identity:44/158 - (27%)
Similarity:61/158 - (38%) Gaps:41/158 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1094 SEKCRFCKQTVYLMEKTTVEGLVLHRNCLKCHHCHTNLRLGGYAFDRDDPQGRFYCTQHFRLPPK 1158
            :.||..|::|||..||.|..|...|:.||||..|:..|..||:|    :..|:.||  |     |
Zfish     2 ASKCPKCEKTVYSAEKVTSLGKDWHKFCLKCERCNKTLNPGGHA----EHDGKPYC--H-----K 55

  Fly  1159 PL------PQRTNKARKSAAAQPASPAVPPTAGSVPTAAATSEHMDTTPPRDQVDLLETSRANAS 1217
            |.      |:..|.....:....    .|....|||.|      |:|.|..::   .:.:|....
Zfish    56 PCYAALYGPKGVNIGGAGSYVYD----TPVGDDSVPVA------METKPKTEE---KKATRGPVK 107

  Fly  1218 ADAMSDDEANVIDEHEWSGR-NFLPESN 1244
            |.:.|          .:||. |..|..|
Zfish   108 AASFS----------SFSGEPNICPRCN 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MicalNP_001247015.1 UbiH 128..>263 CDD:440419
CH_SF 567..669 CDD:469584
LIM_Mical 1097..1153 CDD:188823 22/55 (40%)
PRK10819 <1450..>1557 CDD:236768
bMERB_dom 4592..4705 CDD:463467
crip2lNP_001005968.1 LIM1_TLP 5..58 CDD:188860 25/63 (40%)
LIM1_TLP 121..174 CDD:188860 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.

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