DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mical and Mlp84B

DIOPT Version :9

Sequence 1:NP_001247015.1 Gene:Mical / 41225 FlyBaseID:FBgn0053208 Length:4743 Species:Drosophila melanogaster
Sequence 2:NP_001303418.1 Gene:Mlp84B / 40849 FlyBaseID:FBgn0014863 Length:495 Species:Drosophila melanogaster


Alignment Length:425 Identity:91/425 - (21%)
Similarity:139/425 - (32%) Gaps:120/425 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   903 RERGDIPS----------ALPRTADEQFSDRIKN---MEQRMTGRG--------GLGGDKKPKDL 946
            ||.||:||          |:.|..:.:...|...   ..::|..||        ..|..||..|.
  Fly    92 RENGDVPSVRNGARLEPRAIARAPEGEGCPRCGGYVYAAEQMLARGRSWHKECFKCGTCKKGLDS 156

  Fly   947 MRAIGKIDSN--------------------------------DWNVREIEKKIELSKKTEIHGPK 979
            :......|.|                                |....:|...|::.|   |....
  Fly   157 ILCCEAPDKNIYCKGCYAKKFGPKGYGYGQGGGALQSDCYAHDDGAPQIRAAIDVDK---IQARP 218

  Fly   980 GREKVPKWSKEQFQARQHKMSKPQRQDSREAEKFKDIDQTIRNLDKQLKEGHNLDV------GER 1038
            | |..|:.....:.|.| |:|| .|:..::....||..:|:.:::  ..:|.:.||      |::
  Fly   219 G-EGCPRCGGVVYAAEQ-KLSK-GREWHKKCFNCKDCHKTLDSIN--ASDGPDRDVYCRTCYGKK 278

  Fly  1039 -GRNKVASIAGQ-FGKKDEANSDEKNAGSSNATTNTNNTVIPKSSSKVALAFKKQAASEKCRFCK 1101
             |.:......|. |.:.|....|:.:|  :....|.:.|.|            |....|.|..|.
  Fly   279 WGPHGYGFACGSGFLQTDGLTEDQISA--NRPFYNPDTTSI------------KARDGEGCPRCG 329

  Fly  1102 QTVYLMEKTTVEGLVLHRNCLKCHHCHTNLRLGGYAFDRDDPQGRFYCTQHF--RLPPKPL---- 1160
            ..|:..|:...:|.|.|:.|..|..||..|   ......|.|.|..:|...:  ...||..    
  Fly   330 GAVFAAEQQLSKGKVWHKKCYNCADCHRPL---DSVLACDGPDGDIHCRACYGKLFGPKGFGYGH 391

  Fly  1161 -PQRTNKARKSAAAQP-ASP-AVPPTAGSVPT---AAATSEHMDTTPPRDQVDLLETSRANASAD 1219
             |...:.:.:|....| ..| |.|.|:|..|.   |...:|.|          :.:|...:....
  Fly   392 APTLVSTSGESTIQFPDGRPLAGPKTSGGCPRCGFAVFAAEQM----------ISKTRIWHKRCF 446

  Fly  1220 AMSD-----DEANVIDEHEWS-------GRNFLPE 1242
            ..||     |..|:.|..:..       ||||.|:
  Fly   447 YCSDCRKSLDSTNLNDGPDGDIYCRACYGRNFGPK 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MicalNP_001247015.1 MDR <114..>160 CDD:302572
CH 563..>629 CDD:294029
LIM_Mical 1097..1153 CDD:188823 16/55 (29%)
Ehrlichia_rpt <2081..2479 CDD:118064
DUF3585 4592..4705 CDD:288945
Mlp84BNP_001303418.1 LIM1_MLP84B_like 11..64 CDD:188788
LIM_CRP_like 120..173 CDD:188712 10/52 (19%)
LIM_CRP_like 222..275 CDD:188712 13/56 (23%)
LIM_CRP_like 325..378 CDD:188712 16/55 (29%)
LIM_CRP_like 421..474 CDD:188712 10/62 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2983
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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