DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mical and csrp2

DIOPT Version :10

Sequence 1:NP_001247015.1 Gene:Mical / 41225 FlyBaseID:FBgn0053208 Length:4743 Species:Drosophila melanogaster
Sequence 2:NP_957191.1 Gene:csrp2 / 393871 ZFINID:ZDB-GENE-040426-1863 Length:193 Species:Danio rerio


Alignment Length:118 Identity:36/118 - (30%)
Similarity:46/118 - (38%) Gaps:31/118 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1032 NLDVGERGRNKVASIAGQFGKKDEANSDEKNAGSSNATTNTNNTVIPKSSSKVALAFKKQAASEK 1096
            |:|.|||           .|.|.|.....:      .|||||       :||.|   :|...|||
Zfish    81 NMDRGER-----------LGIKHEETHTHR------PTTNTN-------TSKFA---QKFGGSEK 118

  Fly  1097 CRFCKQTVYLMEKTTVEGLVLHRNCLKCHHCHTNLRLGGYAFDRDDPQGRFYC 1149
            |..|...||..||....|...|:||.:|..|..:|.    :..:.:..|..||
Zfish   119 CARCGDAVYAAEKIMSAGKPWHKNCFRCAKCGKSLE----STTQTEKDGEIYC 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MicalNP_001247015.1 UbiH 128..>263 CDD:440419
CH_SF 567..669 CDD:469584
LIM_Mical 1097..1153 CDD:188823 16/53 (30%)
PRK10819 <1450..>1557 CDD:236768
bMERB_dom 4592..4705 CDD:463467
csrp2NP_957191.1 LIM1_CRP2 9..63 CDD:188864
LIM2_CRP2 119..172 CDD:188871 16/53 (30%)
Blue background indicates that the domain is not in the aligned region.

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