DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mical and csrp2

DIOPT Version :9

Sequence 1:NP_001247015.1 Gene:Mical / 41225 FlyBaseID:FBgn0053208 Length:4743 Species:Drosophila melanogaster
Sequence 2:NP_957191.1 Gene:csrp2 / 393871 ZFINID:ZDB-GENE-040426-1863 Length:193 Species:Danio rerio


Alignment Length:118 Identity:36/118 - (30%)
Similarity:46/118 - (38%) Gaps:31/118 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1032 NLDVGERGRNKVASIAGQFGKKDEANSDEKNAGSSNATTNTNNTVIPKSSSKVALAFKKQAASEK 1096
            |:|.|||           .|.|.|.....:      .|||||       :||.|   :|...|||
Zfish    81 NMDRGER-----------LGIKHEETHTHR------PTTNTN-------TSKFA---QKFGGSEK 118

  Fly  1097 CRFCKQTVYLMEKTTVEGLVLHRNCLKCHHCHTNLRLGGYAFDRDDPQGRFYC 1149
            |..|...||..||....|...|:||.:|..|..:|.    :..:.:..|..||
Zfish   119 CARCGDAVYAAEKIMSAGKPWHKNCFRCAKCGKSLE----STTQTEKDGEIYC 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MicalNP_001247015.1 MDR <114..>160 CDD:302572
CH 563..>629 CDD:294029
LIM_Mical 1097..1153 CDD:188823 16/53 (30%)
Ehrlichia_rpt <2081..2479 CDD:118064
DUF3585 4592..4705 CDD:288945
csrp2NP_957191.1 LIM1_CRP2 9..63 CDD:188864
LIM2_CRP2 119..172 CDD:188871 16/53 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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