DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mical and Micall1

DIOPT Version :9

Sequence 1:NP_001247015.1 Gene:Mical / 41225 FlyBaseID:FBgn0053208 Length:4743 Species:Drosophila melanogaster
Sequence 2:XP_038936207.1 Gene:Micall1 / 362958 RGDID:1305415 Length:866 Species:Rattus norvegicus


Alignment Length:1215 Identity:222/1215 - (18%)
Similarity:356/1215 - (29%) Gaps:439/1215 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   930 RMTGRGGLG----GDKKPKDLMRAIGKIDSNDWNVREIEKKIELSKKTEIHGPKGREKV--PKWS 988
            |:|...|.|    .::.|.: .:|:|.:.|              |||.:....:.::||  .:||
  Rat     3 RVTATRGWGFSSVVERLPSN-RKALGSVPS--------------SKKKKKRKKEKKKKVASTRWS 52

  Fly   989 KEQFQARQHKMSKPQRQDSREAEKFKDIDQTIRNLDKQLKEGHNLDVGERGRNKVASIA------ 1047
               :|.|....|  ..|...:...|::........:|:|.....||     .|.:.|::      
  Rat    53 ---WQWRSQPTS--DFQSLSKENVFENNRLAFEVAEKELGIPALLD-----PNDMVSMSVPDCLS 107

  Fly  1048 ---------GQFGKKDEANSDEKNAGSSNAT---TNTNNTVIP--------KSSSKVALAFKKQA 1092
                     ..|....:|.:.....|...|.   |:|:..|.|        .|...::...|.|.
  Rat   108 IMTYVSQYYNHFTSSGQAAASPPKPGKDPAAPSPTSTSPAVQPGEEAQGDDLSPDSLSEQGKPQP 172

  Fly  1093 ASEKCRFCKQTVYLMEKTTVEGLVLHRNCLKCHHCHTNLRLGGYAFDRDDPQGRFYCTQHF---- 1153
            .|..|..|.|.|:|:::...||.:.||:|.:|..|.:.|..|.|:...:  :|.|.|.:..    
  Rat   173 PSSACAACGQRVHLVQRYLAEGRLYHRHCFRCRQCSSTLVPGSYSSGPE--EGTFVCAERCTRLG 235

  Fly  1154 ---RLPPKPLPQRTNKARKSAAAQ-------PASPAVPPTAGSVPTAAATSE---HMDTTPPRDQ 1205
               |...:||  ...|.:.:|||:       ..|.:|...|.......|:||   |..|.||   
  Rat   236 LGGRSGTRPL--SLQKQQPAAAAEAKDGEDSDLSKSVVVVAAEADGLQASSEVQPHTLTKPP--- 295

  Fly  1206 VDLLETSRANASADAMSDDEANVIDEHEWSGRNFLPESNNDSQSELSSSDESDTESDSEMFEEAD 1270
                                              ||....|..|...|.........||......
  Rat   296 ----------------------------------LPSKPQDLASPPVSRPTPAPRKASESSALTP 326

  Fly  1271 DSPFGAQTLQLASDWIGKQYCEDSDDSDDFYDSSEDDGKDDTEGEEFKKARELRRQEVRLQPLPA 1335
            .:|....:||                .|...:.|...  |...|              |||.|| 
  Rat   327 PTPRPRSSLQ----------------QDGMVEQSVSG--DLVNG--------------RLQELP- 358

  Fly  1336 NLPTDTETEKLKLNVDNKENMADRSSLKSGNSFESARSQPSTPLSTPTRVEMEQLERNAPRKFSS 1400
             :|....|.||      .|.|                   :.|...|..:.:.|.|   |:|   
  Rat   359 -VPKPRGTPKL------SERM-------------------TAPRKDPPWITLVQTE---PKK--- 391

  Fly  1401 EIEAISEKLYHMNNMVKMNKDLEVLAKENLVKSDILRKLTLKEKWLAENAAIAAGQKVTPTPSAT 1465
                                                                    |..|.|.::
  Rat   392 --------------------------------------------------------KPAPLPPSS 400

  Fly  1466 APG-LQPKSK------FDEKFEKVVSPPQPVVEPKPKPVIDFNLDELKPRKPNFEERPKEQLPR- 1522
            .|| |...|:      .:||.:|     .|..||:|||...|..:         ||..:..:|. 
  Rat   401 GPGPLSQASRQVENGGLEEKTQK-----SPAAEPEPKPYNPFEEE---------EEEEEASVPAV 451

  Fly  1523 PESLKKPPQQKPKGSST--NVSRSNSLKSNASNGSPKVKKAPISNNSKMQIEGILGTLRKIQSQN 1585
            |.....||:..||....  |::.::         |||.||.|..                     
  Rat   452 PSPAPAPPETTPKSLHPWYNITPTS---------SPKTKKRPAP--------------------- 486

  Fly  1586 SSDQDEDMDVDEDVERKPNKELNSKLKEIQASSFAGTMDHIKSQLTMPTVSAQAPPSMDLSKYFP 1650
                                         :|.|.:..:.|..........||...|::.:.....
  Rat   487 -----------------------------KAPSASPLVLHASRLSHSEPPSATPSPALSVESLSS 522

  Fly  1651 NQKQEKSSTSSTNKNQVTLKDVNLAKYFPSSPAPQRRTVETVADRLKKSQTEAALAKTKLLEDQA 1715
            ......::|..:....|.....:.|.:.|.:|.....:|...|.....|..|......:.:....
  Rat   523 ESSSHTANTEPSEPPAVPKSSSDPAVHVPGTPGTSANSVTPSAHSSLSSSGELGQPSGEQMPQAR 587

  Fly  1716 NNQAEKTKKEVEKEGESKKITKKVADSKAVPPKRQASLDTFSLREHQMDGALDLTKKKGPTKASA 1780
            ...:..|.......|.:........|.|:..|...:|.....::.         :.|:.|..   
  Rat   588 TRGSPGTHSTKPFSGATPTPFLLAGDQKSPAPPMGSSSPQMLIKS---------SCKENPFN--- 640

  Fly  1781 GVKKPAKSGSTTSVTKATATSK-------GKTIKIVKKIVPKGTKAKKAAEAAQESAVVEAPPEK 1838
              :||:.|.|.| |.|||..:|       |....::|:      |.:......:|....|     
  Rat   641 --RKPSPSTSPT-VRKATKGAKPVRPPAPGHGFPLIKR------KVQADQYIPEEDIYGE----- 691

  Fly  1839 KPPKDEAERILDEILGDGEYRSPSSEYQRLFQDEK-------SPSDLSDNIDRILEESGLDVELG 1896
               .|..||.||.:           |:..:..:||       |..|:..:..:::.|..|     
  Rat   692 ---MDSIERQLDAL-----------EHSGVLLEEKLRGGANGSEDDMLVDWFKLIHEKHL----- 737

  Fly  1897 LPKRSSKKL--VKTKSLGEGDFDM---------KPSKERLTGVQNILKRFESMSSVTSQNSDEQA 1950
            |.:|.|:.:  .|.::|.:...|:         ||.|:                    ...|::|
  Rat   738 LVRRESELIYVFKQQNLEQRQADVEFELRCLLNKPEKD--------------------WTDDDRA 782

  Fly  1951 AFKLRRMESTTSNLSSLTRSRESLVSVSDSMSDLEKTMDYLRNEWRNEATNFLQKKRDKFYAKKE 2015
            ..|:...|     |.:|...|:::|:..|.        |..|.|..::....:.||:|    .:.
  Rat   783 REKVLMQE-----LMTLIEQRDAIVNCLDE--------DRQREEEEDKMLETMIKKKD----FQR 830

  Fly  2016 EQEKESKILAKPDPLDNLPVQYRDSKLAKFFGL---AASKSPENR 2057
            |.|.:||...|          ::..|:.|..|.   |.||:|..:
  Rat   831 EAESDSKKKGK----------FKTMKVLKLLGNKRDAKSKAPTGK 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MicalNP_001247015.1 MDR <114..>160 CDD:302572
CH 563..>629 CDD:294029
LIM_Mical 1097..1153 CDD:188823 18/55 (33%)
Ehrlichia_rpt <2081..2479 CDD:118064
DUF3585 4592..4705 CDD:288945
Micall1XP_038936207.1 CH_SF <62..122 CDD:412120 9/64 (14%)
LIM_Mical_like_1 177..231 CDD:188828 18/55 (33%)
PHA03247 <295..666 CDD:223021 97/616 (16%)
DUF3585 688..809 CDD:403377 31/177 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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