DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mical and Csrp3

DIOPT Version :10

Sequence 1:NP_001247015.1 Gene:Mical / 41225 FlyBaseID:FBgn0053208 Length:4743 Species:Drosophila melanogaster
Sequence 2:NP_038836.1 Gene:Csrp3 / 13009 MGIID:1330824 Length:194 Species:Mus musculus


Alignment Length:84 Identity:25/84 - (29%)
Similarity:35/84 - (41%) Gaps:14/84 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1066 SNATTNTNNTVIPKSSSKVALAFKKQAASEKCRFCKQTVYLMEKTTVEGLVLHRNCLKCHHCHTN 1130
            :.|.|.:|       .||.:..|   ..||||..|.::||..||....|...|:.|.:|..|..:
Mouse    99 ARAATTSN-------PSKFSAKF---GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKS 153

  Fly  1131 LRLGGYAFDRDDPQGRFYC 1149
            |.    :.:..|..|..||
Mouse   154 LE----STNVTDKDGELYC 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MicalNP_001247015.1 UbiH 128..>263 CDD:440419
CH_SF 567..669 CDD:469584
LIM_Mical 1097..1153 CDD:188823 16/53 (30%)
PRK10819 <1450..>1557 CDD:236768
bMERB_dom 4592..4705 CDD:463467
Csrp3NP_038836.1 Interaction with TCAP. /evidence=ECO:0000250|UniProtKB:P50461 1..5
LIM1_CRP3 9..62 CDD:188865
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P50463, ECO:0000255 64..69
Interaction with CLF2. /evidence=ECO:0000250|UniProtKB:P50461 94..105 2/5 (40%)
LIM2_CRP3 120..173 CDD:188866 16/53 (30%)
Blue background indicates that the domain is not in the aligned region.

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