DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5359 and dynlt1b

DIOPT Version :10

Sequence 1:NP_649966.1 Gene:CG5359 / 41222 FlyBaseID:FBgn0037773 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_001129255.1 Gene:dynlt1b / 565740 ZFINID:ZDB-GENE-041210-9 Length:113 Species:Danio rerio


Alignment Length:101 Identity:30/101 - (29%)
Similarity:53/101 - (52%) Gaps:2/101 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 FPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVMLGQELG 133
            |.:..:.||:...:...:....|:.:...:|||.:|::...|:  |.|.|.:|::|..::.|:.|
Zfish    12 FIVDEVSSIVKESLEAVIGRNMYEHNRVSQWTSSVAEQCLGQL--SKLGKPFKYIVTCIIMQKNG 74

  Fly   134 AGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTVFG 169
            ||....|.|.||...|.|.:..:.|..|:|:.:|||
Zfish    75 AGLQSASSCFWDNTTDGSCTVRWENKHLYCIVSVFG 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5359NP_649966.1 DLC-like_TCTEX1D2 69..171 CDD:412007 30/101 (30%)
dynlt1bNP_001129255.1 DLC-like_DYNLT1 12..113 CDD:412010 30/101 (30%)

Return to query results.
Submit another query.