DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5359 and dynlt5

DIOPT Version :10

Sequence 1:NP_649966.1 Gene:CG5359 / 41222 FlyBaseID:FBgn0037773 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_001004623.1 Gene:dynlt5 / 447884 ZFINID:ZDB-GENE-040912-49 Length:173 Species:Danio rerio


Alignment Length:173 Identity:49/173 - (28%)
Similarity:80/173 - (46%) Gaps:27/173 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ADRKSEKS----ASGSLHS-GS---------ADGLENQEKSEKPG-----DQPT-----AYSMRP 63
            :|...||:    ..|||.| ||         .|.:......|:.|     .:||     .|.:.|
Zfish     2 SDLAKEKARLLKKRGSLSSLGSHEVRAIGKTKDSISTLSYMEEHGHHDDIQRPTVQMENTYRITP 66

  Fly    64 AFGEMFPLPTIKSIMNNVMAEKLKDKTYDKDVAKKWTSEIADEVNQQIASSSLVKRYKHVVQVML 128
            :  ..||:.|:|.::.:|:...|:::.|:.::.::.|..|.:.|..:: ...::.|||.:|.:.:
Zfish    67 S--RRFPVLTVKDLLKDVLTSYLQEEKYETELCRQMTKTITEVVKARV-KDLMIPRYKIIVVISI 128

  Fly   129 GQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTVFGTY 171
            ||.........|||.||.:.|...|.:|.|.|||...||||.|
Zfish   129 GQIKDQNIRMGSRCLWDDNHDNFSSHIFKNNSLFAAATVFGVY 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5359NP_649966.1 DLC-like_TCTEX1D2 69..171 CDD:412007 32/101 (32%)
dynlt5NP_001004623.1 DLC-like_TCTEX1D1 70..173 CDD:412006 33/103 (32%)

Return to query results.
Submit another query.