DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and Serpinb6c

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_683744.2 Gene:Serpinb6c / 97848 MGIID:2145481 Length:379 Species:Mus musculus


Alignment Length:187 Identity:51/187 - (27%)
Similarity:88/187 - (47%) Gaps:26/187 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 TTFKVYNAVLYYKYFEHLKMSVLELELDTPEYNLMILLPDYHTDIVAAAASL---KLGPTLRLMR 521
            :|||:       .|.|.:...:|.|.....|.|::|:|||.|.::......:   |.....||.|
Mouse   207 STFKM-------TYVEEISTKILLLPYVGNELNMIIMLPDEHVELSTVEKEITHEKFIEWTRLDR 264

  Fly   522 KQLKPRWVQAIIPDFKLHGTMFLTNDLQNMGICDVFEPNRADFRPMTEEKGVYVRHI-------- 578
              :|...|:..:|.|||.....:.:.|..:|:.|.||..||||..::.::|:::.::        
Mouse   265 --MKGEKVEVFLPWFKLEENYDMKDVLCKLGMTDAFEEGRADFSGISSKQGLFLSNVIHKSVVEV 327

  Fly   579 -EQSIDVTIRTHPINQLKRNYGAQSKPIQISVNHPFLFFIVDRDLDVAVMSGRILNP 634
             |:..:.|..|..:  ||.:  ::|.|. ..||.||:|||.....:..:..||:.:|
Mouse   328 NEEGSEATAATTIV--LKGS--SRSTPC-FCVNRPFIFFIQHIKTNEILFLGRLSSP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 50/185 (27%)
Serpinb6cNP_683744.2 serpin 2..379 CDD:476815 50/185 (27%)
Blue background indicates that the domain is not in the aligned region.

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