DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and Spn55B

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_524953.1 Gene:Spn55B / 49803 FlyBaseID:FBgn0028983 Length:374 Species:Drosophila melanogaster


Alignment Length:201 Identity:51/201 - (25%)
Similarity:89/201 - (44%) Gaps:22/201 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 HYIGEAAEGKSNYNTDVISHVFYLGNQQVVHTTFKVYNAVLYYKYFEHLKMSVLELELDTPEYNL 493
            |:.|..|...|...|:  ..:|::|.::.|...:....|...|.:||.|..:.||:.....:.::
  Fly   168 HFKGSWAHKFSEERTE--EDIFWVGEEEQVKINYMNQKAKFNYGFFEDLGCTALEMPYQDSDLSM 230

  Fly   494 MILLPDYHTDIVAAAASLKLGPTLRL--MRKQLKPRWVQAIIPDFKLHGTMFLTNDLQNMGICDV 556
            .:|||...|.|.|.|..||   |:.|  :..:|....|....|.||:..::.|...|:.:||..:
  Fly   231 FVLLPQERTGIYALAEKLK---TVNLVDLADKLTVEEVHVKFPKFKVDYSLELAEKLKQLGITKM 292

  Fly   557 FEPNRADFRPMTEE-KGVYVRHI---------EQSIDVTIRTHPINQLKRNYGAQSKPIQISVNH 611
            | .::|:|..:.|. :||:|..:         |:..:....|..|...:    ..:.|:|...:.
  Fly   293 F-TDQAEFSNLLESPEGVFVSKVLHKATIEVNEEGTEAAAATGMIMMTR----MMTFPLQFQADR 352

  Fly   612 PFLFFI 617
            |||:.|
  Fly   353 PFLYVI 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 46/180 (26%)
Spn55BNP_524953.1 serpin42Da-like 15..368 CDD:381065 51/201 (25%)
Blue background indicates that the domain is not in the aligned region.

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