DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and serpinb6

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001007932.1 Gene:serpinb6 / 493311 XenbaseID:XB-GENE-1001870 Length:379 Species:Xenopus tropicalis


Alignment Length:251 Identity:59/251 - (23%)
Similarity:96/251 - (38%) Gaps:52/251 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 YIGEAAEGK-----SNYNTD------VISHVFYLGN---------------------QQVVHTTF 462
            ::.:..|||     |:.:.|      :::.:::.||                     .:.|...|
 Frog   135 WVAQKTEGKIKDLLSSGSVDSLTRLVLVNAIYFKGNWANKFNPDHTHESPFRLNKNETKPVQMMF 199

  Fly   463 KVYNAVLYYKYFEHLKMSVLELELDTPEYNLMILLPDYHTDIVAAAASLKLGPTLRLMRKQLKPR 527
            |  .|.....|...|...|:|:.....|.:::|||||...|......:|:...|.....|...|.
 Frog   200 K--KAKFPMTYIGELFTKVVEIPYVDNELSMIILLPDDINDGTTGLEALEKELTYEKFLKWTNPE 262

  Fly   528 W-----VQAIIPDFKLHGTMFLTNDLQNMGICDVFEPNRADFRPMTEEKGVYVRHI--------- 578
            .     ::..:|.|||.....|.:.|..||:.|.|:..||||..|:....:::..:         
 Frog   263 MMDITEMELSLPKFKLEDDYDLESFLSTMGMSDAFDQRRADFSGMSSANDLFLSKVLHKSFVDVN 327

  Fly   579 EQSIDVTIRTHPINQLKRNYGAQSKPIQISVNHPFLFFIVDRDLDVAVMSGRILNP 634
            |:..:....|..|..|:   .|...| :|..:|||||||:.|.....:..||...|
 Frog   328 EEGTEAAAATAAIMMLR---CAMIIP-RIVCDHPFLFFILHRPSQSILFCGRFALP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 53/218 (24%)
serpinb6NP_001007932.1 serpinB 7..376 CDD:381072 57/246 (23%)
Blue background indicates that the domain is not in the aligned region.

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