DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and Spn43Aa

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster


Alignment Length:201 Identity:45/201 - (22%)
Similarity:74/201 - (36%) Gaps:20/201 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   444 DVISHVFYLGNQQVVHTTFKVYNAVLYYKYFEHLKMSVLELELDTPEYNLMILLPDYHTDIVAAA 508
            |.....|:|...:.:.......:...||..:..|....:||..:.....:..:||:..:.:.|..
  Fly   196 DTRDREFWLSESRSIQVPTMFADNWYYYADYPELDAKAIELFFENINLTMWFILPNQRSGLQALE 260

  Fly   509 ASLKLGPTLRLMRKQLKPRW----VQAIIPDFKLHGTMFLTNDLQNMGICDVFEPNRADFRPMTE 569
            ..|| |....|    |:.||    |...:|.||......|...|..|||..:|. :.|||..:.:
  Fly   261 QKLK-GVDFNL----LEDRWQWQSVSVYLPKFKFEFDTDLRPTLHKMGISAMFS-DAADFSNIFQ 319

  Fly   570 EK--GVYVRHIEQSIDVTIRTHPINQLKRNYGA---QSKPIQ---ISVNHPFLFFIVDRDLDVAV 626
            :.  |..:..::....:.:..........:|.|   .|.|:.   ...:|||.|.|  ||.....
  Fly   320 DSPIGTRITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFAFII--RDKHAVY 382

  Fly   627 MSGRIL 632
            .:|.|:
  Fly   383 FTGHIV 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 44/195 (23%)
Spn43AaNP_524805.1 serpin42Dd-like_insects 27..390 CDD:381070 45/201 (22%)
Blue background indicates that the domain is not in the aligned region.

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