DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and Serpinb3c

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_958751.2 Gene:Serpinb3c / 381286 MGIID:1277952 Length:386 Species:Mus musculus


Alignment Length:229 Identity:48/229 - (20%)
Similarity:91/229 - (39%) Gaps:52/229 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 EGKSNYNTD---VISHVFYLGNQQVVHTTFKVYNAVLYYKYFEHLKMSVLELELDTPEYNLMILL 497
            :|:.|:..|   .|..:|:|.....:............:.:.|.::..::|:.....|.::.:||
Mouse   180 KGRWNHKFDENNTIEEMFWLNKNTSIPVPMMKQRNKFMFSFLEDVQAQIVEIPYKGKELSMFVLL 244

  Fly   498 PDYHTDIVAAAASLKLGPTLRLMRKQLKP----RWVQA----------IIPDFKLHGTMFLTNDL 548
            |            ::: ..|:.:.|||..    .|.:|          .:|.||:.....|...|
Mouse   245 P------------MEI-DGLKQLEKQLTAAKLLEWTRAENMHLTELYLWLPRFKVEEKYDLPVPL 296

  Fly   549 QNMGICDVFEPNRADFRPMTEEKGVYVRHIEQSIDVTIRTHPINQLKRNYGAQSKP--------- 604
            :.||:.:.|:|.:|||..|:..:|:.|..:.....|.:...         |.::.|         
Mouse   297 ECMGMVNAFDPQKADFSGMSSTQGLVVSKVLHKSFVEVNEE---------GTEADPASGEEVILR 352

  Fly   605 -IQIS---VNHPFLFFIVDRDLDVAVMSGRILNP 634
             .|::   .:|||||||:....:..:..|||.:|
Mouse   353 LAQVADFRCDHPFLFFIIHSKTNSILFFGRISSP 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 43/210 (20%)
Serpinb3cNP_958751.2 serpin 1..386 CDD:476815 47/227 (21%)
Blue background indicates that the domain is not in the aligned region.

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