DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and Serpinb6b

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_038951899.1 Gene:Serpinb6b / 364705 RGDID:1310452 Length:388 Species:Rattus norvegicus


Alignment Length:238 Identity:54/238 - (22%)
Similarity:94/238 - (39%) Gaps:51/238 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 AEGKSNYNTD--VISHVFYLGN-------QQVVHTTFKVYN------AVLYYK------YFEHLK 478
            :.|..|.||.  :::.:::.||       :......|||..      .:::.|      |.|.:.
  Rat   164 SSGSVNANTPLVLVNAIYFKGNWKKQFNKEDTQEMPFKVTKNEEKPVKMMFKKSTFKMTYVEEIS 228

  Fly   479 MSVLELELDTPEYNLMILLPDYHTDIVAAAASLKLGPTLRLMRKQ--------------LKPRWV 529
            .::|.|.....|.|::|:|||.|.:             ||::.|:              ::.|.|
  Rat   229 TTILLLPYVGNELNMIIMLPDEHIE-------------LRMVEKEITYKKFIEWTSLDKMEEREV 280

  Fly   530 QAIIPDFKLHGTMFLTNDLQNMGICDVFEPNRADFRPMTEEKGVYVRHIEQSIDVTIR---THPI 591
            :..:|.|||.....:.:.|..:|:.|.||...|||..:..::|:::..:.....|.:.   |...
  Rat   281 EVFLPKFKLEENHDMKDVLHRLGMTDAFEQGMADFSGIASKEGLFLSKVIHKSFVEVNEEGTEAA 345

  Fly   592 NQLKRNYGAQSKPIQISVNHPFLFFIVDRDLDVAVMSGRILNP 634
            .....|...:........||||||||.....:..|..||..:|
  Rat   346 AATAANVTFRCMVPYFCANHPFLFFIQHSRTNGIVFCGRFSSP 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 49/219 (22%)
Serpinb6bXP_038951899.1 serpin 1..388 CDD:476815 53/236 (22%)
Blue background indicates that the domain is not in the aligned region.

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