DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and Spn42Db

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster


Alignment Length:206 Identity:42/206 - (20%)
Similarity:76/206 - (36%) Gaps:25/206 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 HYIGEAAEGKSNYNTDVISHVFYLGNQ-----QVVHTTFKVYNAVLYYKYFEHLKMSVLELELDT 488
            |:.|   |...::|........:.|:.     :::|.....:.|||  ..||   .:.|.:....
  Fly   167 HFKG---EWSISFNEKETREEDFFGSDRPTRVRMMHVCENFFFAVL--PMFE---ATALRMNYSA 223

  Fly   489 PEYNLMILLPDYHTDIVAAAASLKLGPTLRLMRKQLKPRWVQAIIPDFKLHGTMFLTNDLQNMGI 553
            ....::|||||..:::.:....|. ..:|.::...:....|...||.|.......|:..|..||:
  Fly   224 CNLAMIILLPDEKSNLTSLEKKLS-DISLEVVSSAMNLEKVDVKIPSFTAEFQQELSQVLMLMGM 287

  Fly   554 CDVFEPNRADFRPMTE-EKGVYVRHI---------EQSIDVTIRTHPINQLKRNYGAQSKPIQIS 608
            ..:|. .:|:...|.: |:.::|..|         |...:....|..:...:.....|..|....
  Fly   288 NRIFS-GQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEAAAATAAVATFRSMPARQGPPKVFH 351

  Fly   609 VNHPFLFFIVD 619
            .|.||.:.|.|
  Fly   352 ANRPFFYAIKD 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 38/185 (21%)
Spn42DbNP_610244.2 serpin42Da-like 9..372 CDD:381065 42/206 (20%)
Blue background indicates that the domain is not in the aligned region.

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