DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn85F and Serpinb9b

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001333297.1 Gene:Serpinb9b / 306892 RGDID:1562844 Length:296 Species:Rattus norvegicus


Alignment Length:204 Identity:49/204 - (24%)
Similarity:80/204 - (39%) Gaps:43/204 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   418 AFAPITNDFEPH---YIGEAAEGK---------SNYNTD-VISHVFYL----GNQQVVHTT---- 461
            :||....:...|   ::.:..|||         .::.|. |:.:..||    |.|....:|    
  Rat    70 SFAEAAEESRKHVNTWVSKQTEGKIPELLPDDSVDFQTRLVLVNALYLKATWGRQFDEGSTREMP 134

  Fly   462 FKV------------YNAVLYYKYFEHLKMSVLELELDTPEYNLMILLPDYHTDIVAAAASLKLG 514
            ||:            ...:..|||.:.:..|:|.:.....|...::||||...||......|   
  Rat   135 FKINKNETRPVQMMYQEGIFCYKYVKEVPASLLMIPYKGDELCFLVLLPDESVDISKVEEEL--- 196

  Fly   515 PTLRLMRKQLKP-----RWVQAIIPDFKLHGTMFLTNDLQNMGICDVFEPNRADFRPMTEEKGVY 574
             |...:....:|     ..|:..:|.|||.....|.:.||.:||.|.||..:||...|..|:.:.
  Rat   197 -TFEKLTAWTQPDTMSYTHVEVFLPKFKLEEDYDLKSLLQRLGIVDAFEETKADLSAMAPERNLC 260

  Fly   575 V-RHIEQSI 582
            | :.:.:|:
  Rat   261 VSKFVHKSV 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 41/159 (26%)
Serpinb9bNP_001333297.1 serpin 7..293 CDD:476815 49/204 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.