DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and Serpinb12

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001129339.1 Gene:Serpinb12 / 304692 RGDID:1566382 Length:421 Species:Rattus norvegicus


Alignment Length:197 Identity:44/197 - (22%)
Similarity:86/197 - (43%) Gaps:34/197 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   461 TFKVYNAVLYYK--YFEHLKMSVLELELDTPEYNLMILLPDYHTDIVAAAASLKLGPTLRLMRKQ 523
            |.|:.|....::  :.|.|:..:||::..|.:.::::|||....|.|.:...|:    .::..::
  Rat   236 TVKMMNQKGQFRIGFIEELQAQILEMKYTTGKLSMLVLLPSSSEDNVKSLQELE----KKINHEK 296

  Fly   524 L-----------KPRWVQAIIPDFKLHGTMFLTNDLQNMGICDVFEPNRADFRPMTEEKGVYVRH 577
            |           ||  |....|.|.:..:..|.:.||:|||.|||:..:||...:::...:::..
  Rat   297 LLAWSNPENMSEKP--VAISFPQFIMEDSYDLNSVLQDMGIRDVFDGTKADLTGISKSPSLHLSK 359

  Fly   578 IEQSIDVTIRTHPINQLKRNYGAQS----------KPIQISVNHPFLFFIVDRDLDVAVMSGRIL 632
            :.....|     .::::.....|.|          ..::.:.|.||||||........:..||:.
  Rat   360 VVHKTFV-----EVDEMGTQAAAASGAVVAEKALPSRVEFNANRPFLFFIRHNGTQSLLFCGRVY 419

  Fly   633 NP 634
            :|
  Rat   420 SP 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 43/195 (22%)
Serpinb12NP_001129339.1 serpinB12_yukopin 1..421 CDD:381037 43/195 (22%)
Blue background indicates that the domain is not in the aligned region.

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