DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and Serpinb13

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_063128285.1 Gene:Serpinb13 / 304690 RGDID:1304661 Length:390 Species:Rattus norvegicus


Alignment Length:184 Identity:45/184 - (24%)
Similarity:77/184 - (41%) Gaps:35/184 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   471 YKYFEHLKMSVLELELDTPEYNLMILLPDYHTDIVAAAASL-KLGPTLRLMR----KQLKPRWVQ 530
            :...|.|:..::.:.....::::.:|||:   ||......: ||.|. :|:.    .|||.|.|.
  Rat   222 FTLLEDLQAKIVGIPYKNSDFSMFVLLPN---DIDGLEKIIDKLSPE-KLVEWTSPGQLKQRKVD 282

  Fly   531 AIIPDFKLHGTMFLTNDLQNMGICDVFEPNRADFRPMTEEKGVYVRHI---------EQSIDVTI 586
            ..:|..|:..|..|...|:.:||...|. ..||:..|:...|:..::.         |:.::.|.
  Rat   283 LRLPRLKVEETYDLQPTLEAVGIHSAFS-EHADYSGMSAHSGLQTQNFLHRSFLVVTEEGVEATA 346

  Fly   587 RTHPINQLKRNYGAQSKPIQ------ISVNHPFLFFIVDRDLDVAVMSGRILNP 634
            .|          |...|.:.      :..|||||||:..|:.|..:..||..:|
  Rat   347 GT----------GVGFKVLSAASCELVHCNHPFLFFVRHRESDSILFFGRFSSP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 44/182 (24%)
Serpinb13XP_063128285.1 None
Blue background indicates that the domain is not in the aligned region.

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