DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and Serpinb6a

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:XP_006253933.1 Gene:Serpinb6a / 291085 RGDID:735108 Length:400 Species:Rattus norvegicus


Alignment Length:299 Identity:64/299 - (21%)
Similarity:96/299 - (32%) Gaps:76/299 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 SVQPANISVTRKTKTARYKRHAIPAYKDLDANLFLT-----------LFNPHTHVPHHPLHF--- 411
            |.|..|..|.:||:. :.|....|...|.|..|.|.           .||.. |....|...   
  Rat   153 SRQRINTWVAKKTED-KIKELLAPGIVDPDTVLVLVNAIYFKGNWDKQFNKE-HTREKPFKVSKT 215

  Fly   412 -PPPVPAAFAPITNDFEPHYIGEAAEGKSNYNTDVISHVFYLGNQQVVHTTFKVYNAVLYYKYFE 475
             ..||...|...|  |:..||||                              ::..:|...|..
  Rat   216 EEKPVQMMFMKST--FKMTYIGE------------------------------IFTKILLLPYAG 248

  Fly   476 HLKMSVLELELDTPEYNLMILLPDYHTDIVAAAASLKLGPTLRLMR-KQLKPRWVQAIIPDFKLH 539
            :             |.|::|:|||.|.::......|.....:...| ..|....|:..:|.|||.
  Rat   249 N-------------ELNMIIMLPDEHIELKTVEKELTYEKFIEWTRLDMLDEEEVEVFLPRFKLE 300

  Fly   540 GTMFLTNDLQNMGICDVFEPNRADFRPMTEEKGVYVRHIEQSIDVTIRTHPINQLKRNYGAQSKP 604
            ....:...|..:|:.|.|...||||..:..::|:::..:.....|.:.......:    .|....
  Rat   301 ENYDMKVVLGKLGMTDAFMEGRADFSGIASKQGLFLSKVIHKAFVEVNEEGTEAV----AATGST 361

  Fly   605 I---------QISVNHPFLFFIVDRDLDVAVMSGRILNP 634
            |         :...:|||||||........:..||..:|
  Rat   362 ITMRCLRFTPRFLADHPFLFFIQHVKTKGILFCGRFSSP 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 38/193 (20%)
Serpinb6aXP_006253933.1 serpinB6_CAP 22..400 CDD:381031 63/297 (21%)
Blue background indicates that the domain is not in the aligned region.

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