DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn85F and Serpina3g

DIOPT Version :10

Sequence 1:NP_649965.2 Gene:Spn85F / 41221 FlyBaseID:FBgn0037772 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_033277.2 Gene:Serpina3g / 20715 MGIID:105046 Length:440 Species:Mus musculus


Alignment Length:231 Identity:57/231 - (24%)
Similarity:93/231 - (40%) Gaps:50/231 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   424 NDFEPHYIGEAAEGKSNYNTDVISHVFYLGNQQVVHTTFKVYNAVLYYKYF--EHLKMSVLELEL 486
            |.|:|:              |.....|||..::.|..:. :....|...||  |.|..:|:||:.
Mouse   207 NPFDPN--------------DTFKSEFYLDEKRSVIVSM-MKTGYLTTPYFRDEELSCTVVELKY 256

  Fly   487 DTPEYNLMILLPDYHTDIVAAAASLKLGPTLRLMRKQLKPRWVQAI-IPDFKLHGTMFLTNDLQN 550
             |...:.|.:||| ...:....|||: ..|||..:..||||.:..: :|.|.:.....|.:.|..
Mouse   257 -TGNASAMFILPD-QGRMQQVEASLQ-PETLRKWKNSLKPRMIHELRLPKFSISTDYSLEHILPE 318

  Fly   551 MGICDVFEPNRADFRPMTEEKGVYVRHI--EQSIDVTIRTHPINQLKRNYGAQSKP--------- 604
            :||.:||. .:||...:|..|.:.|..:  :..:||..:           |.::..         
Mouse   319 LGIREVFS-TQADLSAITGTKDLRVSQVVHKAVLDVAEK-----------GTEAAAATGMAGVGC 371

  Fly   605 ------IQISVNHPFLFFIVDRDLDVAVMSGRILNP 634
                  ::|..|.|||..|.|....:|:...::.||
Mouse   372 CAVFDFLEIFFNRPFLMIISDTKAHIALFMAKVTNP 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn85FNP_649965.2 serpin 72..>174 CDD:476815
Serpin <450..634 CDD:459662 51/203 (25%)
Serpina3gNP_033277.2 serpinA3_A1AC 27..408 CDD:381019 57/231 (25%)
RCL 357..382 2/24 (8%)
Blue background indicates that the domain is not in the aligned region.

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