DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art4 and PRMT6

DIOPT Version :9

Sequence 1:NP_001262445.1 Gene:Art4 / 41219 FlyBaseID:FBgn0037770 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001326463.1 Gene:PRMT6 / 821541 AraportID:AT3G20020 Length:443 Species:Arabidopsis thaliana


Alignment Length:398 Identity:129/398 - (32%)
Similarity:209/398 - (52%) Gaps:73/398 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 SQRTEESSAS-------QYFQFYGYLSQQQNMMQDYVRTSTYQRAILGNAVDFQDKIVLDVGAGS 190
            |..|.|||..       .||..|.::...:.|::|..||.||:.||:.:....:.|:|:|||.|:
plant    65 SLETSESSPPPCTDFDVAYFHSYAHVGIHEEMIKDRARTETYREAIMQHQSLIEGKVVVDVGCGT 129

  Fly   191 GILSFFAVQAGAAKVYAIEASNMAQYAQQLVESNNVQHKISVIPGKIEEIELPEKVDVIISEPMG 255
            ||||.|..||||.:|||::||::|..|:::|::|.:..|:.|:.|::|::|:.|:|||||||.||
plant   130 GILSIFCAQAGAKRVYAVDASDIAVQAKEVVKANGLSDKVIVLHGRVEDVEIDEEVDVIISEWMG 194

  Fly   256 YMLYNERMLETYLHAR-KWLKPQGKMYPTHGDLHIAPFSDESLYSEQYNKANFWYQSAFHGVDLT 319
            |||..|.||.:.:.|| :||||.|.:.|:|..|::||.|....||   :..:||..  .:|:|::
plant   195 YMLLYESMLGSVITARDRWLKPGGLILPSHATLYMAPISHPDRYS---HSIDFWRN--VYGIDMS 254

  Fly   320 TLHKEGMKEYFRQPIVDTF--DIRICMAKSVRHVCDFLNDKEDDLHLISIPLEFHILQTGICHGL 382
            .:.:...:..|.:|.|::.  :..:...:.|:|: |....|..:|..::...:|:.:.....||.
plant   255 AMMQLAKQCAFEEPSVESISGENVLTWPEVVKHI-DCKTIKIQELDSVTARYKFNSMMRAPMHGF 318

  Fly   383 AFWFDVEFSG----------------------------------SSQNVWLSTSPTAPLTHWYQV 413
            ||||||||||                                  .|..:.|||||.:|.|||.|.
plant   319 AFWFDVEFSGPASSPAKNTSETSIASGSSSISPSGEVNQKKRTNPSDALVLSTSPESPPTHWQQT 383

  Fly   414 RCLLPMPIFIKQGQTLTGRVLL---EANRRQSYDVTIDLHIEGTLISSSNTLDLKNP---YFRYT 472
            ......||.::|.|.:.|.|.|   :.|:|     .:::|:|.:|:::     |.:|   :|:: 
plant   384 IVYFYDPIDVEQDQVIEGSVTLSQSKENKR-----FMNIHLEYSLVAT-----LFHPFQFFFKF- 437

  Fly   473 GAPVQAPP 480
                  ||
plant   438 ------PP 439

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity