DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art4 and PRMT3

DIOPT Version :9

Sequence 1:NP_001262445.1 Gene:Art4 / 41219 FlyBaseID:FBgn0037770 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_187835.2 Gene:PRMT3 / 820407 AraportID:AT3G12270 Length:601 Species:Arabidopsis thaliana


Alignment Length:569 Identity:142/569 - (24%)
Similarity:217/569 - (38%) Gaps:172/569 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 CQFC------------------GVVISSIADEQKLEFTNKYKGSCTLLCSYDSQGVV------LR 64
            |.||                  |.....:..|.||:|.:.:|     |.:|....|.      .:
plant    57 CLFCDSHFVSCDLLFEHCRLSHGFDFHGVRKELKLDFYSSFK-----LINYIRSQVAENMCFSWK 116

  Fly    65 VVSDD--------DRSHVLKEYMIAADTDAAQMGRRSYAVSLDADNLVLRFA-SEQDQQLF---R 117
            :.:||        |....||.:.                   ..|:|:..|| .|:|:::.   .
plant   117 IEADDYKDVKFPWDEEKYLKPFW-------------------QEDSLLYSFADDEEDEEVTFDRE 162

  Fly   118 KVVENVKHLRPKSVFSQRTEESSAS---------------------------------------- 142
            :|:|.::.|...|:..:...|||.|                                        
plant   163 EVMEELQKLGDLSIDVEALGESSMSNSDKCNINGSKDVTSLSNCNGLKQSSADDLIVNGKDAEPK 227

  Fly   143 ----------------QYFQFYGYLSQQQNMMQDYVRTSTYQRAILGNAVDFQDKIVLDVGAGSG 191
                            .||..|......:.|:.|.|||..|:.|:|.|.......:|:|||.|:|
plant   228 VCDGRLVNRNIRKVNENYFGSYSSFGIHREMLSDKVRTEAYRDALLKNPTLLNGSVVMDVGCGTG 292

  Fly   192 ILSFFAVQAGAAKVYAIEAS-NMAQYAQQLVESNNV----QHK--ISVIPGKIEEIE-----LPE 244
            |||.||.:|||::|.|:||| .||:.|.::.:.|.|    :|.  :.|....:||::     .|.
plant   293 ILSLFAAKAGASRVVAVEASEKMAKVATKIAKDNKVFNDNEHNGVLEVAHSMVEELDKSIQIQPH 357

  Fly   245 KVDVIISEPMGYMLYNERMLETYLHAR-KWLKPQGKMYPTHGDLHIAPFSDESLYSEQYNKANFW 308
            .|||::||.|||.|..|.||.:.|:|| :||||.|.:.|....:.:|.|...:      ....||
plant   358 SVDVLVSEWMGYCLLYESMLSSVLYARDRWLKPGGAILPDTATMFVAGFGKGA------TSLPFW 416

  Fly   309 YQSAFHGVDLTTLHKEGMKEYFRQPIVDTFDIR-ICMAKSVRHVCDFLNDKEDDLHLISI----P 368
              ...:|.|::::.||...:..|.||||....| :....::....|....|.|::...:.    |
plant   417 --EDVYGFDMSSIGKEIHDDTTRLPIVDVIAERDLVTQPTLLQTFDLATMKPDEVDFTATATLEP 479

  Fly   369 LEFHILQTGICHGLAFWFDVEFSG---SSQNVWLSTSPTAPLTHWYQVRCLLPMPIFIKQGQTLT 430
            .|.. .:|.:|||:..|||..|:.   ......|||||..|.|||.|.......||.:.....|:
plant   480 TESE-AKTRLCHGVVLWFDTGFTSRFCKENPTVLSTSPYTPPTHWAQTILTFQEPISVAPASVLS 543

  Fly   431 GRVLLEANRRQSYDV---------------------TIDLHIEGTLISS 458
            |.     :||::...                     :||:.:|.|.:||
plant   544 GN-----DRREAIGTEECPASSIHLRVSVARAHEHRSIDISLEATGLSS 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art4NP_001262445.1 PH-like 24..134 CDD:302622 27/145 (19%)
PRMT5 53..430 CDD:282971 123/471 (26%)
AdoMet_MTases 183..281 CDD:100107 49/110 (45%)
PRMT3NP_187835.2 zf-C2H2_2 57..>112 CDD:403839 12/59 (20%)
AdoMet_MTases 232..>330 CDD:418430 36/97 (37%)
Methyltransf_25 284..392 CDD:404528 48/107 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D840669at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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