DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art4 and prmt2

DIOPT Version :9

Sequence 1:NP_001262445.1 Gene:Art4 / 41219 FlyBaseID:FBgn0037770 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_012826019.1 Gene:prmt2 / 780163 XenbaseID:XB-GENE-980934 Length:634 Species:Xenopus tropicalis


Alignment Length:491 Identity:141/491 - (28%)
Similarity:221/491 - (45%) Gaps:85/491 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSLRPEEAR--KLATAASVSPLSNCQFCGVVISSIADEQKLEFTNKYKGSCTLLCSYDSQGVVLR 64
            |..:||:|.  |:...::::...:....|      ...:|.:|.:..:|.               
 Frog   178 SDNKPEKAEFIKIEKQSAITEEKSMSTSG------CSSEKSDFQDSTEGE--------------- 221

  Fly    65 VVSDDDRSH--VLKEYMIAADTDAAQMGRRSYAVSLDADNLVLRFASEQDQQLFRKVVEN----V 123
             ..:|.:|.  .::||::..|..||           ||..|.|.|.   |:.|....|..    |
 Frog   222 -EEEDTQSENLCMREYVVIRDYMAA-----------DATQLSLCFG---DKVLLLSAVTQDWWWV 271

  Fly   124 KH-----LRPKSVF------SQRTEESSASQYFQFYG---YLSQQQNMMQDYVRTSTYQRAILGN 174
            ||     ..|.|..      .:.||.....|..::||   .|.....|:.|..||:.|:..||.|
 Frog   272 KHNGICGYVPASYLHDALNDQEDTEVDDPWQDEEYYGSYKTLKLHLEMLSDVPRTTAYKEVILRN 336

  Fly   175 AVDFQDKIVLDVGAGSGILSFFAVQ-AGAAKVYAIEASNMAQYAQQLVESNNVQHKISVIPGKIE 238
            :.....|.:||:|.|:||:|||..: |....|||:|||.:|:..::||:.|.:.:.:.||..:.|
 Frog   337 SSSLCGKHILDLGCGTGIISFFCAKLAQPEAVYAVEASEIAEQTRRLVKQNGISNLVHVIRQRAE 401

  Fly   239 EIELPEKVDVIISEPMGYMLYNERMLETYLHAR-KWLKPQGKMYPTHGDLHIAPFSDESLYSEQY 302
            |::||.|||:::||.||..|..|.|||:.|.|| :|||..|.|:|:...:|:.|.|....|:   
 Frog   402 ELQLPTKVDILVSEWMGTCLLFEFMLESVLQARDRWLKEDGVMWPSTACIHLVPCSASKEYA--- 463

  Fly   303 NKANFW---YQSAFHGVDLTTLHKEGMKEYFRQPIVD-TFDIRICMAKSVRHVCDFLNDKEDDLH 363
            ||..||   ||     :|.:.|.....||:|.:|..| ......|:::.    |..|:.....|.
 Frog   464 NKVLFWDNPYQ-----LDFSLLKPLAAKEFFARPKPDYVLQPEDCLSEP----CILLHLNLKTLQ 519

  Fly   364 LISI-----PLEFHILQTGICHGLAFWFDVEFSGSSQ--NVWLSTSPTAPLTHWYQVRCLLPMPI 421
            |..:     ...|.:...|:.||...||.|:|....:  .:.|:|.|.:|||||.....:|..|:
 Frog   520 LAELERMNSDFTFFVHTDGLLHGFTAWFSVQFQNLEEQGQLELNTGPFSPLTHWKHTLFMLDEPL 584

  Fly   422 FIKQGQTLTGRVLLEANR--RQSYDVTIDLHIEGTL 455
            .:::|..::|.|:.:.|.  |:...||:...|.|.|
 Frog   585 QVQKGDKISGSVVFQRNSVWRRHMSVTLSWVINGKL 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art4NP_001262445.1 PH-like 24..134 CDD:302622 24/126 (19%)
PRMT5 53..430 CDD:282971 123/409 (30%)
AdoMet_MTases 183..281 CDD:100107 45/99 (45%)
prmt2XP_012826019.1 2A1904 <22..>232 CDD:273344 11/75 (15%)
SH3 235..287 CDD:388381 18/65 (28%)
Methyltransf_25 345..442 CDD:379312 44/96 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D840669at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.