DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art4 and Carm1

DIOPT Version :9

Sequence 1:NP_001262445.1 Gene:Art4 / 41219 FlyBaseID:FBgn0037770 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_067506.2 Gene:Carm1 / 59035 MGIID:1913208 Length:608 Species:Mus musculus


Alignment Length:472 Identity:272/472 - (57%)
Similarity:348/472 - (73%) Gaps:20/472 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 DSQGVVLRVVSDDDRSH----VLKEYMIAADTDAAQMGRRSYAVSLDADNLVLRFASEQDQQLFR 117
            |:.|:.|       .||    |.| ..::.:|:.:::||:|:.::|..::::::||:..|...|.
Mouse    66 DAAGIAL-------YSHEDVCVFK-CSVSRETECSRVGRQSFIITLGCNSVLIQFATPHDFCSFY 122

  Fly   118 KVVENVK-HLRPKSVFSQRTEESSASQYFQFYGYLSQQQNMMQDYVRTSTYQRAILGNAVDFQDK 181
            .:::..: |...:||||:|||||||.||||||||||||||||||||||.|||||||.|..||:||
Mouse   123 NILKTCRGHTLERSVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDK 187

  Fly   182 IVLDVGAGSGILSFFAVQAGAAKVYAIEASNMAQYAQQLVESNNVQHKISVIPGKIEEIELPEKV 246
            ||||||.|||||||||.||||.|:||:|||.|||:|:.||:|||:..:|.|||||:||:.|||:|
Mouse   188 IVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 252

  Fly   247 DVIISEPMGYMLYNERMLETYLHARKWLKPQGKMYPTHGDLHIAPFSDESLYSEQYNKANFWYQS 311
            |:||||||||||:||||||:||||:|:|||.|.|:||.||:|:|||:||.||.||:.|||||||.
Mouse   253 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQP 317

  Fly   312 AFHGVDLTTLHKEGMKEYFRQPIVDTFDIRICMAKSVRHVCDFLNDKEDDLHLISIPLEFHILQT 376
            :||||||:.|....:.||||||:||||||||.|||||::..:||..||.|||.|.||.:||:|.:
Mouse   318 SFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHS 382

  Fly   377 GICHGLAFWFDVEFSGSSQNVWLSTSPTAPLTHWYQVRCLLPMPIFIKQGQTLTGRVLLEANRRQ 441
            |:.|||||||||.|.||...|||||:||.|||||||||||...|:|.|.|.||:|..||.||:||
Mouse   383 GLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQ 447

  Fly   442 SYDVTIDLHIEGTLISSSNTLDLKNPYFRYTGAPVQAPPGTSTQSPSEQYWTQVDTQGSRNSSSM 506
            |||::|...::.|...|||.||||||:|||||.....|||:...||||..|       :..|:..
Mouse   448 SYDISIVAQVDQTGSKSSNLLDLKNPFFRYTGTTPSPPPGSHYTSPSENMW-------NTGSTYN 505

  Fly   507 LNGGISVNGIGEGMDIT 523
            |:.|::|.|:....|::
Mouse   506 LSSGVAVAGMPTAYDLS 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art4NP_001262445.1 PH-like 24..134 CDD:302622 20/81 (25%)
PRMT5 53..430 CDD:282971 231/377 (61%)
AdoMet_MTases 183..281 CDD:100107 71/97 (73%)
Carm1NP_067506.2 CARM1 35..139 CDD:402914 19/80 (24%)
AdoMet_MTases 189..284 CDD:100107 70/94 (74%)
Transactivation domain 500..608 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832332
Domainoid 1 1.000 338 1.000 Domainoid score I1106
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10990
Inparanoid 1 1.050 550 1.000 Inparanoid score I1133
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D840669at2759
OrthoFinder 1 1.000 - - FOG0004110
OrthoInspector 1 1.000 - - oto93276
orthoMCL 1 0.900 - - OOG6_104007
Panther 1 1.100 - - LDO PTHR11006
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4498
SonicParanoid 1 1.000 - - X2851
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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