DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art4 and Carm1

DIOPT Version :10

Sequence 1:NP_649963.1 Gene:Art4 / 41219 FlyBaseID:FBgn0037770 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_067506.2 Gene:Carm1 / 59035 MGIID:1913208 Length:608 Species:Mus musculus


Alignment Length:472 Identity:272/472 - (57%)
Similarity:348/472 - (73%) Gaps:20/472 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 DSQGVVLRVVSDDDRSH----VLKEYMIAADTDAAQMGRRSYAVSLDADNLVLRFASEQDQQLFR 117
            |:.|:.|       .||    |.| ..::.:|:.:::||:|:.::|..::::::||:..|...|.
Mouse    66 DAAGIAL-------YSHEDVCVFK-CSVSRETECSRVGRQSFIITLGCNSVLIQFATPHDFCSFY 122

  Fly   118 KVVENVK-HLRPKSVFSQRTEESSASQYFQFYGYLSQQQNMMQDYVRTSTYQRAILGNAVDFQDK 181
            .:::..: |...:||||:|||||||.||||||||||||||||||||||.|||||||.|..||:||
Mouse   123 NILKTCRGHTLERSVFS
ERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDK 187

  Fly   182 IVLDVGAGSGILSFFAVQAGAAKVYAIEASNMAQYAQQLVESNNVQHKISVIPGKIEEIELPEKV 246
            ||||||.|||||||||.||||.|:||:|||.|||:|:.||:|||:..:|.|||||:||:.|||:|
Mouse   188 IVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 252

  Fly   247 DVIISEPMGYMLYNERMLETYLHARKWLKPQGKMYPTHGDLHIAPFSDESLYSEQYNKANFWYQS 311
            |:||||||||||:||||||:||||:|:|||.|.|:||.||:|:|||:||.||.||:.|||||||.
Mouse   253 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQP 317

  Fly   312 AFHGVDLTTLHKEGMKEYFRQPIVDTFDIRICMAKSVRHVCDFLNDKEDDLHLISIPLEFHILQT 376
            :||||||:.|....:.||||||:||||||||.|||||::..:||..||.|||.|.||.:||:|.:
Mouse   318 SFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHS 382

  Fly   377 GICHGLAFWFDVEFSGSSQNVWLSTSPTAPLTHWYQVRCLLPMPIFIKQGQTLTGRVLLEANRRQ 441
            |:.|||||||||.|.||...|||||:||.|||||||||||...|:|.|.|.||:|..||.||:||
Mouse   383 GLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQ 447

  Fly   442 SYDVTIDLHIEGTLISSSNTLDLKNPYFRYTGAPVQAPPGTSTQSPSEQYWTQVDTQGSRNSSSM 506
            |||::|...::.|...|||.||||||:|||||.....|||:...||||..|       :..|:..
Mouse   448 SYDISIVAQVDQTGSKSSNLLDLKNPFFRYTGTTPSPPPGSHYTSPSENMW-------NTGSTYN 505

  Fly   507 LNGGISVNGIGEGMDIT 523
            |:.|::|.|:....|::
Mouse   506 LSSGVAVAGMPTAYDLS 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art4NP_649963.1 PH-like 24..134 CDD:473070 20/81 (25%)
COG4076 154..341 CDD:443253 135/186 (73%)
Carm1NP_067506.2 Interaction with C9orf72. /evidence=ECO:0000269|PubMed:30366907 28..139 19/80 (24%)
CARM1 35..139 CDD:402914 19/80 (24%)
COG4076 160..347 CDD:443253 135/186 (73%)
Required for nuclear translocation. /evidence=ECO:0000269|PubMed:30366907 347..380 19/32 (59%)
Transactivation domain. /evidence=ECO:0000269|PubMed:11701890 500..608 6/23 (26%)

Return to query results.
Submit another query.