DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Art4 and Carm1

DIOPT Version :10

Sequence 1:NP_649963.1 Gene:Art4 / 41219 FlyBaseID:FBgn0037770 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001025212.1 Gene:Carm1 / 363026 RGDID:1305879 Length:608 Species:Rattus norvegicus


Alignment Length:468 Identity:272/468 - (58%)
Similarity:349/468 - (74%) Gaps:12/468 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 DSQGVVLRVVSDDDRSHVLKEYMIAADTDAAQMGRRSYAVSLDADNLVLRFASEQDQQLFRKVVE 121
            |:.|:.|  .|.:|.. |.| ..::.:|:.:::||:|:.::|..::::::||:..|...|..:::
  Rat    66 DAAGIAL--YSHEDVC-VFK-CSVSRETECSRVGRQSFIITLGCNSVLIQFATPHDFCSFYNILK 126

  Fly   122 NVK-HLRPKSVFSQRTEESSASQYFQFYGYLSQQQNMMQDYVRTSTYQRAILGNAVDFQDKIVLD 185
            ..: |...:||||:|||||||.||||||||||||||||||||||.|||||||.|..||:||||||
  Rat   127 TCRGHTLERSVFS
ERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLD 191

  Fly   186 VGAGSGILSFFAVQAGAAKVYAIEASNMAQYAQQLVESNNVQHKISVIPGKIEEIELPEKVDVII 250
            ||.|||||||||.||||.|:||:|||.|||:|:.||:|||:..:|.|||||:||:.|||:||:||
  Rat   192 VGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIII 256

  Fly   251 SEPMGYMLYNERMLETYLHARKWLKPQGKMYPTHGDLHIAPFSDESLYSEQYNKANFWYQSAFHG 315
            ||||||||:||||||:||||:|:|||.|.|:||.||:|:|||:||.||.||:.|||||||.:|||
  Rat   257 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHG 321

  Fly   316 VDLTTLHKEGMKEYFRQPIVDTFDIRICMAKSVRHVCDFLNDKEDDLHLISIPLEFHILQTGICH 380
            |||:.|....:.||||||:||||||||.|||||::..:||..||.|||.|.||.:||:|.:|:.|
  Rat   322 VDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVH 386

  Fly   381 GLAFWFDVEFSGSSQNVWLSTSPTAPLTHWYQVRCLLPMPIFIKQGQTLTGRVLLEANRRQSYDV 445
            ||||||||.|.||...|||||:||.|||||||||||...|:|.|.|.||:|..||.||:|||||:
  Rat   387 GLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQSYDI 451

  Fly   446 TIDLHIEGTLISSSNTLDLKNPYFRYTGAPVQAPPGTSTQSPSEQYWTQVDTQGSRNSSSMLNGG 510
            :|...::.|...|||.||||||:|||||.....|||:...||||..|       :..|:..|:.|
  Rat   452 SIVAQVDQTGSKSSNLLDLKNPFFRYTGTTPSPPPGSHYTSPSENMW-------NTGSTYNLSSG 509

  Fly   511 ISVNGIGEGMDIT 523
            ::|.|:....|::
  Rat   510 VAVAGMPTAYDLS 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art4NP_649963.1 PH-like 24..134 CDD:473070 20/77 (26%)
COG4076 154..341 CDD:443253 135/186 (73%)
Carm1NP_001025212.1 CARM1 35..139 CDD:402914 19/76 (25%)
COG4076 160..347 CDD:443253 135/186 (73%)

Return to query results.
Submit another query.