DRSC/TRiP Functional Genomics Resources

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Protein Alignment Art4 and Prmt9

DIOPT Version :9

Sequence 1:NP_001262445.1 Gene:Art4 / 41219 FlyBaseID:FBgn0037770 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001178528.1 Gene:Prmt9 / 291947 RGDID:1306157 Length:841 Species:Rattus norvegicus


Alignment Length:446 Identity:112/446 - (25%)
Similarity:190/446 - (42%) Gaps:105/446 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 MGRRSYAVSLDADNLVLRFASEQDQQLFR------------KVVENVKHLRPKSVFSQRTEESSA 141
            :|....|:.|..|:.|:  .:...:.|||            |.|:    |.|.  |:...|    
  Rat    87 LGCYEQALELFPDDEVI--CNSMGEHLFRMGFRDEAAGYFHKAVK----LNPD--FNDAKE---- 139

  Fly   142 SQYFQFYGYLSQQQN--MMQDYVRTSTYQRAILGNAVDFQDKIVLDVGAGSGILSFFAVQAGAAK 204
             .:::...:|.::.:  |:.|..|...|..|| ..||....|.|||:|||:||||.||.:|||..
  Rat   140 -NFYRVANWLVERWHFIMLNDTKRNEIYNAAI-QKAVRLGSKTVLDIGAGTGILSMFAKKAGAHS 202

  Fly   205 VYAIEAS-NMAQYAQQLVESNNVQHKISVIPGKIEEIE----LPEKVDVIISEPMGYMLYNERML 264
            |||.|.| .|.:.|..:|.:|.::..|.::..|..::|    :||:|.::::|.:...::.|.::
  Rat   203 VYACELSKTMYELACDVVAANKMEDGIRLLHMKSLDLEIPKHIPERVSLVVTETVDAGVFGEGIV 267

  Fly   265 ETYLHARKW----LKPQ-----------GKMYPTHGDLHIAPFSDESLYSEQYNK---------- 304
            |:.:||  |    |:||           ||:.|  ....|:..:.|.....::::          
  Rat   268 ESLIHA--WEHLLLQPQTKGESGSWGKYGKVIP--ASAVISGMAVECAEIRRHHRVSAKDIAGIH 328

  Fly   305 --ANFWYQS-AFHGVD-------LTTLHKEGMKEYFRQPIVDTFDIRICMAKSVRHVCDFLNDKE 359
              .|..:|| |:..||       .||....|:...:| |:.:.|.|......:::.:......|.
  Rat   329 LPTNVRFQSPAYASVDPEETVEPYTTEKMSGIPGGYR-PLTECFQIMKVDFNNLQELKSLATRKP 392

  Fly   360 DDLHLISIPLEFHILQTGICHGLAFWFDVEFSGSSQNVWLSTSPTAPLTHW----YQVRCLLPMP 420
               |.:|:|    .::.|....:..||.::......   |||||:.. |.|    |.|:.|  ..
  Rat   393 ---HSLSVP----AVKEGTLDAIMVWFVLQLDDEHS---LSTSPSEE-TCWEQAVYPVQAL--ED 444

  Fly   421 IFIKQGQTLTGRVLLEANRRQSY----DVTIDLHIE------GTLISSSNTLDLKN 466
            .:|:.|..:|    :||:....|    .::| ||:|      .:...|.:.|.|.|
  Rat   445 YWIQPGDQVT----MEASCHDCYLRIQGISI-LHLEHEMEVIKSFTKSKDLLSLGN 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art4NP_001262445.1 PH-like 24..134 CDD:302622 13/56 (23%)
PRMT5 53..430 CDD:282971 100/398 (25%)
AdoMet_MTases 183..281 CDD:100107 41/117 (35%)
Prmt9NP_001178528.1 TPR_11 68..132 CDD:290150 11/50 (22%)
TPR repeat 68..95 CDD:276809 2/7 (29%)
TPR repeat 100..130 CDD:276809 6/35 (17%)
AdoMet_MTases 148..>338 CDD:302624 56/194 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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