DRSC/TRiP Functional Genomics Resources

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Protein Alignment Art4 and carm1

DIOPT Version :9

Sequence 1:NP_001262445.1 Gene:Art4 / 41219 FlyBaseID:FBgn0037770 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_002942887.1 Gene:carm1 / 100170180 XenbaseID:XB-GENE-484572 Length:602 Species:Xenopus tropicalis


Alignment Length:530 Identity:288/530 - (54%)
Similarity:369/530 - (69%) Gaps:45/530 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AASVSPLSNCQFCGVVISSIAD---------EQKLEFTNKYKGSCTLLCSYDSQGVVLRVVSDDD 70
            |.||.|       ||.:.||.|         ||: |...:.:|....|  |:::.|.        
 Frog     3 AVSVFP-------GVRLLSIGDANGEIQRHAEQR-ELRLEARGGDIAL--YNAENVC-------- 49

  Fly    71 RSHVLKEYMIAADTDAAQMGRRSYAVSLDADNLVLRFASEQDQQLFRKVVENVK-HLRPKSVFSQ 134
               |.| ..::.||:.:::|::|:.|:|..::::::||:..|...|..:::..: ....|||||:
 Frog    50 ---VFK-CTVSRDTECSRVGKQSFIVTLGCNSVLVQFATPADFCSFYNIIKGCRTPASEKSVFSE 110

  Fly   135 RTEESSASQYFQFYGYLSQQQNMMQDYVRTSTYQRAILGNAVDFQDKIVLDVGAGSGILSFFAVQ 199
            |||||||.||||||||||||||||||||||.|||||||.|..||:||:|||||.|||||||||||
 Frog   111 RTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKVVLDVGCGSGILSFFAVQ 175

  Fly   200 AGAAKVYAIEASNMAQYAQQLVESNNVQHKISVIPGKIEEIELPEKVDVIISEPMGYMLYNERML 264
            |||.||||:|||.|||:|:.||:|||:..:|.|||||:||..|||:||:||||||||||:|||||
 Frog   176 AGARKVYAVEASTMAQHAELLVKSNNLTDRIVVIPGKVEETALPEQVDIIISEPMGYMLFNERML 240

  Fly   265 ETYLHARKWLKPQGKMYPTHGDLHIAPFSDESLYSEQYNKANFWYQSAFHGVDLTTLHKEGMKEY 329
            |:||||:|:|||.|.|:||.||:|:|||:||.||.||:.|||||||.:||||||:.|....:.||
 Frog   241 ESYLHAKKFLKPNGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEY 305

  Fly   330 FRQPIVDTFDIRICMAKSVRHVCDFLNDKEDDLHLISIPLEFHILQTGICHGLAFWFDVEFSGSS 394
            |:||:||||||||.|||||::..:||:.||.|||.|.||..||:|.:|:.|||||||||.|.||.
 Frog   306 FKQPVVDTFDIRILMAKSVKYTVNFLDAKEADLHRIEIPFSFHMLHSGLVHGLAFWFDVAFIGSI 370

  Fly   395 QNVWLSTSPTAPLTHWYQVRCLLPMPIFIKQGQTLTGRVLLEANRRQSYDVTIDLHIEGTLISSS 459
            ..|||||:||.||||||||||||..|:|.|.|.||||..||.||:|||||::|...::.|...||
 Frog   371 MTVWLSTAPTEPLTHWYQVRCLLQSPLFTKAGDTLTGTALLIANKRQSYDISIVAQVDQTGSKSS 435

  Fly   460 NTLDLKNPYFRYTGAPVQAPPGTSTQSPSEQYWTQVDTQGSRNSSSMLNGGISVNGIGEGMDI-- 522
            |.||||||:|||||:....|||:...||||..|   :|.|:.:    :|.|:.:.|:....|:  
 Frog   436 NLLDLKNPFFRYTGSTPSPPPGSHYSSPSENMW---NTSGAYS----MNTGMGMGGMPNAYDLSS 493

  Fly   523 ----THGLMH 528
                :.|:.|
 Frog   494 VIAGSSGISH 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Art4NP_001262445.1 PH-like 24..134 CDD:302622 28/119 (24%)
PRMT5 53..430 CDD:282971 231/377 (61%)
AdoMet_MTases 183..281 CDD:100107 73/97 (75%)
carm1XP_002942887.1 CARM1 9..109 CDD:371585 27/114 (24%)
Methyltransf_25 159..254 CDD:379312 72/94 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 340 1.000 Domainoid score I1092
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10990
Inparanoid 1 1.050 550 1.000 Inparanoid score I1121
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D233082at33208
OrthoFinder 1 1.000 - - FOG0004110
OrthoInspector 1 1.000 - - otm48382
Panther 1 1.100 - - LDO PTHR11006
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4498
SonicParanoid 1 1.000 - - X2851
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.190

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