DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9458 and elo-3

DIOPT Version :9

Sequence 1:NP_731419.1 Gene:CG9458 / 41214 FlyBaseID:FBgn0037765 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001367447.1 Gene:elo-3 / 183948 WormBaseID:WBGene00001241 Length:320 Species:Caenorhabditis elegans


Alignment Length:258 Identity:64/258 - (24%)
Similarity:108/258 - (41%) Gaps:75/258 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VKIAGPKIMRNRKPFDLRGLIKAYNIMQIVYNVIMCFFAVHFMLGPGDYNFKCIKNLPPDHEYKT 103
            |...|.|||...|||.|...:..:|          .|.|:..:||        ...:.|:..: :
 Worm    51 VIFTGKKIMEKYKPFQLDTPLFVWN----------SFLAIFSILG--------FLRMTPEFVW-S 96

  Fly   104 WER---------------------WLTYSYFFNKLLDLLETVFFVLRKKDRQISFLHVFHHMYML 147
            |..                     | |..:..:||.:|::|:|.||||  |.:.|||.:||:.::
 Worm    97 WSAEGNSFKYSICHSSYAQGVTGFW-TEQFAMSKLFELIDTIFIVLRK--RPLIFLHWYHHVTVM 158

  Fly   148 YFSFMYLYYYGYGGH---GFFMCFFNVVVHIMMYSYYYQSSLNRDSKGDLWWKKY---------I 200
            .::     ::.|..|   |.:..:.|..||.:|||||...||           |:         :
 Worm   159 IYT-----WHAYKDHTASGRWFIWMNYGVHALMYSYYALRSL-----------KFRLPKQMAMVV 207

  Fly   201 TIVQLIQ--FGIVLGHSIYTLKQPD--CPSARFSATCAGSISVVFIILFSNFYFHAYIRPKKR 259
            |.:||.|  .|:::|.::|.:|...  |.....:......:...:.:||:||::|||::...|
 Worm   208 TTLQLAQMVMGVIIGVTVYRIKSSGEYCQQTWDNLGLCFGVYFTYFLLFANFFYHAYVKKNNR 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9458NP_731419.1 ELO 20..261 CDD:279492 64/258 (25%)
elo-3NP_001367447.1 ELO 33..270 CDD:395916 63/256 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1820
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100813
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.770

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