DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16904 and Elovl1

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001037740.1 Gene:Elovl1 / 679532 RGDID:1587151 Length:279 Species:Rattus norvegicus


Alignment Length:274 Identity:90/274 - (32%)
Similarity:137/274 - (50%) Gaps:43/274 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ADP-VQ-LPLAGSIRTSVIIITVYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFNSVI--- 69
            ||| :| .||.||......|:..|:.|||.||.::|...:..||||.:..||...|..:..|   
  Rat    15 ADPRIQNYPLMGSPLLITSILLTYVYFVLSLGPRIMANRKPFQLRGFMIVYNFSLVTLSLYIVYE 79

  Fly    70 ---------FVWGIHLL-FVQKPYNLSCMQVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVL 124
                     :.|....: |...|..|..::|              ::::.|:||::||||:.|:|
  Rat    80 FLMSGWLSTYTWRCDPVDFSNNPEALRMVRV--------------AWLFMLSKVIELMDTVIFIL 130

  Fly   125 RKKQRQITFLHVFHHVFMVFTSHMLIRFYGF----GGHVFLICMFNVLVHIVMYGYYYASSQSQN 185
            |||..|:||||||||..:.::     .::|.    ||......|.|..||:|||.||..|:....
  Rat   131 RKKDGQVTFLHVFHHSVLPWS-----WWWGIKIAPGGMGSFHAMINSSVHVVMYLYYGLSALGPV 190

  Fly   186 VQESLWWKKYLTLGQLVQFLLMFLHCMYTYFQPNCSASRG-VIYVISSASAFMFLMFTKFYIKTY 249
            .|..|||||::|..||:||:|:.||....||.|:|:.... :|::|.......|::|:.|:..:|
  Rat   191 AQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMPSCNYQYPIIIHLIWMYGTIFFILFSNFWYHSY 255

  Fly   250 IR----PKEVKSKG 259
            .:    |:.|:..|
  Rat   256 TKGKRLPRAVQQNG 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 85/262 (32%)
Elovl1NP_001037740.1 ELO 23..262 CDD:460083 83/257 (32%)

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