DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16904 and Baldspot

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_648909.1 Gene:Baldspot / 39860 FlyBaseID:FBgn0260960 Length:316 Species:Drosophila melanogaster


Alignment Length:247 Identity:65/247 - (26%)
Similarity:112/247 - (45%) Gaps:36/247 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFNSVIFVWGI--------HLLFVQKPYNLS 86
            :|:|.:.. |:..|......||||.|       :::|:::.::.|        .|:.|.:.|.|.
  Fly    44 IYMLVIFG-GQHFMQNRPRFQLRGPL-------IIWNTLLAMFSIMGAARTAPELIHVLRHYGLF 100

  Fly    87 CMQVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFHHVFMVFTSHMLIR 151
            ....:|...|........::::.|:|:.:|.||||.||||  :.:.|||.:||:.::..|.....
  Fly   101 HSVCVPSYIEQDRVCGFWTWLFVLSKLPELGDTIFIVLRK--QPLIFLHWYHHITVLIYSWFSYT 163

  Fly   152 FYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTLGQLVQFLLMFLHC----- 211
            .|......|::  .|..||.|||.||...:...|....:  ...:|..||.|   |.:.|     
  Fly   164 EYTSSARWFIV--MNYCVHSVMYSYYALKAARFNPPRFI--SMIITSLQLAQ---MIIGCAINVW 221

  Fly   212 ----MYTYFQPNCSAS-RGVIYVISSASAFMFLMFTKFYIKTYIRPKEVKSK 258
                :.|:...:|..| |.:...|:..|:: |::|.:|:.|.|:.|...||:
  Fly   222 ANGFLKTHGTSSCHISQRNINLSIAMYSSY-FVLFARFFYKAYLAPGGHKSR 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 63/244 (26%)
BaldspotNP_648909.1 ELO 30..271 CDD:460083 63/244 (26%)

Return to query results.
Submit another query.