DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16904 and Elo68alpha

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_729666.2 Gene:Elo68alpha / 317841 FlyBaseID:FBgn0052072 Length:262 Species:Drosophila melanogaster


Alignment Length:264 Identity:90/264 - (34%)
Similarity:136/264 - (51%) Gaps:26/264 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DKPFADPVQLPLAGSIRTSVIIITVYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFNSVIF 70
            |:|.......||..|..|..:::::|||.| :...|...:|:.||||..|..:::..|..|..|.
  Fly    13 DQPDERTRNWPLVDSFWTVPVLLSIYLLMV-RYAPKWTTRHKPLQLRAPLFCHSLAMVFLNGYIC 76

  Fly    71 VWGIHLLFVQKPYNLSCM--QVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITF 133
            : .::.......||..|.  :|....||::.|:  ..:.::::|:|:..||.||:||:|..|::|
  Fly    77 L-ELYAATRDLDYNFGCQPCRVSFDPHEMRLTK--AFWWFYISKILEFADTAFFILRQKWSQLSF 138

  Fly   134 LHVFHHVFMVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTL 198
            |||:||..|.....:||::...|. .::..|.|..|||:|||||..|.....||..||||:|||.
  Fly   139 LHVYHHSTMFVFCWILIKWMPTGS-TYVPAMINSFVHIIMYGYYALSVLGPRVQRFLWWKRYLTG 202

  Fly   199 GQLVQFLLMFLHCMYTYFQPNCSASRGVIY----VISSA---SAFMFLMFTKFYIKTYIRPKEVK 256
            .|||||.::|       |..:....||..|    .:|.|   ..|:| ||.|||::.|    .|.
  Fly   203 LQLVQFTIIF-------FWASQMLVRGCEYGTWITLSMAIYSLPFLF-MFGKFYMQKY----TVS 255

  Fly   257 SKGK 260
            :.||
  Fly   256 AVGK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 86/249 (35%)
Elo68alphaNP_729666.2 ELO 23..260 CDD:460083 88/254 (35%)

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