DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16904 and Elovl4

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001178725.1 Gene:Elovl4 / 315851 RGDID:1305630 Length:314 Species:Rattus norvegicus


Alignment Length:269 Identity:98/269 - (36%)
Similarity:144/269 - (53%) Gaps:28/269 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FEVFDKPFADPVQLPLAGSIRTSVIIITVYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFN 66
            :.:.||...|   .||..|...::.|.|:|||||. ||.|.|...|..|:|.||..||.|.||.|
  Rat    30 WSIADKRVED---WPLMQSPWPTLSISTLYLLFVW-LGPKWMKDREPFQMRLVLIIYNFGMVLLN 90

  Fly    67 SVIFVWGIHLLFV---QKPYNLSCMQVLPQDHELKSTERTLS---YMYHLNKVLDLMDTIFFVLR 125
            ..||    ..||:   ...|:..|..|   |:.....|..::   :.|.::|.::.:||:||:||
  Rat    91 LFIF----RELFMGSYNAGYSYICQSV---DYSNDVNEVRIAAALWWYFVSKGVEYLDTVFFILR 148

  Fly   126 KKQRQITFLHVFHHVFMVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESL 190
            ||..|::||||:||..| ||...:...:..||..|.....|..:|::||.||..::....:|:.|
  Rat   149 KKNNQVSFLHVYHHCTM-FTLWWIGIKWVAGGQAFFGAQMNSFIHVIMYSYYGLTAFGPWIQKYL 212

  Fly   191 WWKKYLTLGQLVQFLLMFLH---CMYTYFQPNCSASRGVIY-VISSASAFMFLMFTKFYIKTYIR 251
            |||:|||:.|||||.:...|   .:||    :|...:.:.: :|:.|.:|:|| |..||.:||..
  Rat   213 WWKRYLTMLQLVQFHVTIGHTALSLYT----DCPFPKWMHWALIAYAISFIFL-FLNFYTRTYNE 272

  Fly   252 PKEVKSKGK 260
            ||:.|: ||
  Rat   273 PKKSKT-GK 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 92/250 (37%)
Elovl4NP_001178725.1 ELO 41..278 CDD:460083 92/250 (37%)

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