DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16904 and elo-3

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001367447.1 Gene:elo-3 / 183948 WormBaseID:WBGene00001241 Length:320 Species:Caenorhabditis elegans


Alignment Length:267 Identity:73/267 - (27%)
Similarity:115/267 - (43%) Gaps:54/267 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SIRTSVIIITVYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFNSVI--------FVWGIHL 76
            ||..||:.:.|  :|.   |:|:|:|::..||...|..:|....:| |::        |||....
 Worm    41 SITASVVYVAV--IFT---GKKIMEKYKPFQLDTPLFVWNSFLAIF-SILGFLRMTPEFVWSWSA 99

  Fly    77 LFVQKPYNLSCMQVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFHHV- 140
            ......|:: |.....|......||:     :.::|:.:|:||||.||||  |.:.|||.:||| 
 Worm   100 EGNSFKYSI-CHSSYAQGVTGFWTEQ-----FAMSKLFELIDTIFIVLRK--RPLIFLHWYHHVT 156

  Fly   141 FMVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTLGQLVQFL 205
            .|::|.| ..:.:...|..|:  ..|..||.:||.||...|....:.:.:  ...:|..||.|.:
 Worm   157 VMIYTWH-AYKDHTASGRWFI--WMNYGVHALMYSYYALRSLKFRLPKQM--AMVVTTLQLAQMV 216

  Fly   206 LMFL-------------HCMYTYFQPNCSASRGVIYVISSASAFMFLMFTKFYIKTYI----RPK 253
            :..:             :|..|:  .|.....||.:.       .||:|..|:...|:    |..
 Worm   217 MGVIIGVTVYRIKSSGEYCQQTW--DNLGLCFGVYFT-------YFLLFANFFYHAYVKKNNRYT 272

  Fly   254 EVKSKGK 260
            |||...|
 Worm   273 EVKKDKK 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 71/262 (27%)
elo-3NP_001367447.1 ELO 33..270 CDD:460083 68/256 (27%)

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