DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16904 and elo-3

DIOPT Version :9

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001367447.1 Gene:elo-3 / 183948 WormBaseID:WBGene00001241 Length:320 Species:Caenorhabditis elegans


Alignment Length:267 Identity:73/267 - (27%)
Similarity:115/267 - (43%) Gaps:54/267 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SIRTSVIIITVYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFNSVI--------FVWGIHL 76
            ||..||:.:.|  :|.   |:|:|:|::..||...|..:|....:| |::        |||....
 Worm    41 SITASVVYVAV--IFT---GKKIMEKYKPFQLDTPLFVWNSFLAIF-SILGFLRMTPEFVWSWSA 99

  Fly    77 LFVQKPYNLSCMQVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFHHV- 140
            ......|:: |.....|......||:     :.::|:.:|:||||.||||  |.:.|||.:||| 
 Worm   100 EGNSFKYSI-CHSSYAQGVTGFWTEQ-----FAMSKLFELIDTIFIVLRK--RPLIFLHWYHHVT 156

  Fly   141 FMVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTLGQLVQFL 205
            .|::|.| ..:.:...|..|:  ..|..||.:||.||...|....:.:.:  ...:|..||.|.:
 Worm   157 VMIYTWH-AYKDHTASGRWFI--WMNYGVHALMYSYYALRSLKFRLPKQM--AMVVTTLQLAQMV 216

  Fly   206 LMFL-------------HCMYTYFQPNCSASRGVIYVISSASAFMFLMFTKFYIKTYI----RPK 253
            :..:             :|..|:  .|.....||.:.       .||:|..|:...|:    |..
 Worm   217 MGVIIGVTVYRIKSSGEYCQQTW--DNLGLCFGVYFT-------YFLLFANFFYHAYVKKNNRYT 272

  Fly   254 EVKSKGK 260
            |||...|
 Worm   273 EVKKDKK 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:279492 71/262 (27%)
elo-3NP_001367447.1 ELO 33..270 CDD:395916 68/256 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100813
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.