DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16904 and elo-4

DIOPT Version :9

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_499056.1 Gene:elo-4 / 183367 WormBaseID:WBGene00001242 Length:291 Species:Caenorhabditis elegans


Alignment Length:253 Identity:61/253 - (24%)
Similarity:107/253 - (42%) Gaps:34/253 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IIITVYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFNSV----IFVWGIHLLFVQKPYNLS 86
            |.|:|....::|:.:|.|:..:...|:..|..:|.....|:.:    ..:..:..|:.:..|...
 Worm    56 ITISVLYFILIKVIQKFMENRKPFTLKYPLILWNGALAAFSIIATLRFSIDPLRSLYAEGFYKTL 120

  Fly    87 CMQVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFHH-VFMVFTSH--- 147
            |....|.|     .....|:.:.|:|:::|.||:|.:|||  |.:.|||.:|| ..:::|.|   
 Worm   121 CYSCNPTD-----VAAFWSFAFALSKIVELGDTMFIILRK--RPLIFLHYYHHAAVLIYTVHSGA 178

  Fly   148 ---MLIRFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTLGQLVQFL---- 205
               ...|||         .:.|...|.:||.||..|:....:.:  |....:|..|..|.|    
 Worm   179 EHTAAGRFY---------ILMNYFAHSLMYTYYTVSAMGYRLPK--WVSMTVTTVQTTQMLAGVG 232

  Fly   206 -LMFLHCMYTYFQPNCSASRGVIYVISSASAFMFLMFTKFYIKTYIRPKEVKSKGKVN 262
             ...::.:.|.::..|..|...:|:.........::|.:|::|.||.....|||...|
 Worm   233 ITWMVYKVKTEYKLPCQQSVANLYLAFVIYVTFAILFIQFFVKAYIIKSSKKSKSVKN 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:279492 57/246 (23%)
elo-4NP_499056.1 ELO 48..278 CDD:279492 55/239 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100813
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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