DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16904 and elo-2

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_503114.1 Gene:elo-2 / 178532 WormBaseID:WBGene00001240 Length:274 Species:Caenorhabditis elegans


Alignment Length:285 Identity:68/285 - (23%)
Similarity:132/285 - (46%) Gaps:49/285 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFEVFDKPFA-DPVQLPLAGSIRTSVIIITVYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVL 64
            :.:|..||:: |.....::..:..|..|:..||: .:..|:|||...:...|:..|..:|.|..|
 Worm    12 LVDVLTKPWSLDQTDSYMSTFVPLSYKIMIGYLV-TIYFGQKLMAHRKPFDLQNTLALWNFGFSL 75

  Fly    65 FNSVIF------VWGIHLLFVQKPYNLSCMQVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFV 123
            |:.:..      ::|:   |::..:..|..|  .:::...::.....:.:.::|..:|.||:|.|
 Worm    76 FSGIAAYKLIPELFGV---FMKDGFVASYCQ--NENYYTDASTGFWGWAFVMSKAPELGDTMFLV 135

  Fly   124 LRKKQRQITFLHVFHHVF------MVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYASSQ 182
            ||||  .:.|:|.:||..      :.::.|.....:...        .|:.||.||  |:|.:.:
 Worm   136 LRKK--PVIFMHWYHHALTFVYAVVTYSEHQAWARWSLA--------LNLAVHTVM--YFYFAVR 188

  Fly   183 SQNVQESLWWKKYLTLGQLVQFLL---MFLHCMYTYFQ---PNCSAS------RGVIYVISSASA 235
            :.|:|......|::|..|:|||::   :|.|.::....   |.|:.|      .|::|:     :
 Worm   189 ALNIQTPRPVAKFITTIQIVQFVISCYIFGHLVFIKSADSVPGCAVSWNVLSIGGLMYI-----S 248

  Fly   236 FMFLMFTKFYIKTYIRPKEVKSKGK 260
            ::|| |.||:.|.||:.:......|
 Worm   249 YLFL-FAKFFYKAYIQKRSPTKTSK 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 63/264 (24%)
elo-2NP_503114.1 ELO 29..269 CDD:460083 63/263 (24%)

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