DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16904 and elo-6

DIOPT Version :9

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_500797.1 Gene:elo-6 / 177321 WormBaseID:WBGene00001244 Length:274 Species:Caenorhabditis elegans


Alignment Length:251 Identity:65/251 - (25%)
Similarity:114/251 - (45%) Gaps:37/251 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFN---SVIFVWGIHLLFVQKPYNLSCMQVL 91
            |.::|.||   .:|...:...|.|.|..:|.|..:|:   |:...:|:...|..:.:..|.:.:.
 Worm    41 VVVIFGLK---AVMTNRKPFDLTGPLNLWNAGLAIFSTLGSLATTFGLLHEFFSRGFFESYIHIG 102

  Fly    92 PQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFHHV------FMVFTSHMLI 150
            ...:.|..   ..::::.|:||.:..||:|.:||||  .:.|||.:|||      ||.|.:::  
 Worm   103 DFYNGLSG---MFTWLFVLSKVAEFGDTLFIILRKK--PLMFLHWYHHVLTMNYAFMSFEANL-- 160

  Fly   151 RFYGFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTLGQLVQFLL---MFLHCM 212
               ||.   ..|...|..||.:|||||..  :|..|:...|..|.:|..|::||::   :..|..
 Worm   161 ---GFN---TWITWMNFSVHSIMYGYYML--RSFGVKVPAWIAKNITTMQILQFVITHFILFHVG 217

  Fly   213 Y-TYFQPNCSASRGVIYVISSASAFMFLMFTKFYIKTYIR------PKEVKSKGKV 261
            | .....:..::.|..:..........::|..||.::||:      ..|.|::.|:
 Worm   218 YLAVTGQSVDSTPGYYWFCLLMEISYVVLFGNFYYQSYIKGGGKKFNAEKKTEKKI 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:279492 63/245 (26%)
elo-6NP_500797.1 ELO 33..262 CDD:279492 62/238 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100813
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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