DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16904 and Elovl5

DIOPT Version :10

Sequence 1:NP_649957.1 Gene:CG16904 / 41212 FlyBaseID:FBgn0037763 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_063120907.1 Gene:Elovl5 / 171400 RGDID:620583 Length:306 Species:Rattus norvegicus


Alignment Length:226 Identity:78/226 - (34%)
Similarity:111/226 - (49%) Gaps:18/226 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VYLLFVLKLGRKLMDKHEALQLRGVLKFYNIGQVLFNSVIF------VWGIHLLFVQKPYNLSCM 88
            :|||.|. ||.|.|...:....||:|..||:|..|.:..:|      ||       :..||..|.
  Rat    48 IYLLIVW-LGPKYMKNRQPFSCRGILVVYNLGLTLLSLYMFYELVTGVW-------EGKYNFFCQ 104

  Fly    89 QVLPQDHELKSTERTLSYMYHLNKVLDLMDTIFFVLRKKQRQITFLHVFHHVFMVFTSHMLIRFY 153
            .............|.| :.|:.:|:::.|||.||:|||...|||.|||:||..|:.....::.:.
  Rat   105 GTRSAGESDMKVIRVL-WWYYFSKLIEFMDTFFFILRKNNHQITVLHVYHHATMLNIWWFVMNWV 168

  Fly   154 GFGGHVFLICMFNVLVHIVMYGYYYASSQSQNVQESLWWKKYLTLGQLVQFLLMFLHCMYTYFQP 218
            .. ||.:.....|..:|::||.||..|| ..:::..||||||:|.||||||:|..:........|
  Rat   169 PC-GHSYFGATLNSFIHVLMYSYYGLSS-VPSMRPYLWWKKYITQGQLVQFVLTIIQTSCGVIWP 231

  Fly   219 NCSASRGVIYVISSASAFMFLMFTKFYIKTY 249
             ||...|.:|........:..:||.|||:||
  Rat   232 -CSFPLGWLYFQIGYMISLIALFTNFYIQTY 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16904NP_649957.1 ELO 16..257 CDD:460083 78/226 (35%)
Elovl5XP_063120907.1 None

Return to query results.
Submit another query.