DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eloF and AT3G06460

DIOPT Version :10

Sequence 1:NP_649956.1 Gene:eloF / 41211 FlyBaseID:FBgn0037762 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_187297.1 Gene:AT3G06460 / 819823 AraportID:AT3G06460 Length:298 Species:Arabidopsis thaliana


Alignment Length:290 Identity:74/290 - (25%)
Similarity:114/290 - (39%) Gaps:94/290 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PVVSN-PWI---TMGTLIGYLLFVLK------------------LGPKIMEHRKPFHLNGVIRIY 53
            |.::| .|.   |:|:.:.::..|:.                  |||:|:   ||          
plant    16 PYIANFTWTEGETLGSTVFFVFVVVSLYLSATFLLRYTVDSLPTLGPRIL---KP---------- 67

  Fly    54 NIFQILYNGLILVLGVH--FLFVLK-AYQISCIVSL----------------PMDHKYKDRERLI 99
                        :..||  .||:|. ...:.|.:||                |:|.|.|......
plant    68 ------------ITAVHSLILFLLSLTMAVGCTLSLISSSDPKARLFDAVCFPLDVKPKGPLFFW 120

  Fly   100 CTLYLVNKFVDLVETIFFVLRKKDRQISFLHVFHHFAMAFFGYLYYCFHGYGGVAFPQCL-LNTA 163
            ..::.::|.::.|:|:..:|.|..:::|||||:||..:....||:....   ...||..| ||:.
plant   121 AQVFYLSKILEFVDTLLIILNKSIQRLSFLHVYHHATVVILCYLWLRTR---QSMFPVGLVLNST 182

  Fly   164 VHVIMYAYYYLSSISKEVQRSLWWKKYITIAQLVQFAIILLHCTITLAQPNCAVNRPLTY---GC 225
            ||||||.||:|.:|....:    |||.:|..|:||||..:        ....|...|..|   ||
plant   183 VHVIMYGYYFLCAIGSRPK----WKKLVTNFQMVQFAFGM--------GLGAAWMLPEHYFGSGC 235

  Fly   226 ---------GSLSAFFAVIFSQFYYHNYIK 246
                     |..:|....:|..|:..||.|
plant   236 AGIWTVYFNGVFTASLLALFYNFHSKNYEK 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eloFNP_649956.1 ELO 11..252 CDD:460083 74/290 (26%)
AT3G06460NP_187297.1 ELO 28..270 CDD:460083 71/278 (26%)

Return to query results.
Submit another query.