DRSC/TRiP Functional Genomics Resources

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Protein Alignment eloF and elovl6

DIOPT Version :9

Sequence 1:NP_649956.1 Gene:eloF / 41211 FlyBaseID:FBgn0037762 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001017257.2 Gene:elovl6 / 550011 XenbaseID:XB-GENE-942876 Length:265 Species:Xenopus tropicalis


Alignment Length:245 Identity:61/245 - (24%)
Similarity:112/245 - (45%) Gaps:38/245 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YLLFVLKLGPKIMEHRKPFHLNGVIRIYNIFQILYN--GLILVLGVHFLFVLKA---YQISCIVS 85
            |..|:.. |..:|:.|:.|.|...:.::::...:::  |.:.. |.:.|::|..   .|..|..|
 Frog    40 YAAFIFG-GRHLMKQREKFELRKPLILWSLSLAVFSIFGAVRT-GAYMLYILMTKGLKQSVCDQS 102

  Fly    86 LPMDHKYKDRERLICTLYLVNKFVDLVETIFFVLRKKDRQISFLHVFHHFAMAFFGYLYYCFHGY 150
            .    .|....:.....::::|..:|.:|||.:|||  :::.|||.:||..:..:.:..|.....
 Frog   103 F----YYGPVSKFWAYAFVLSKAPELGDTIFIILRK--QKLIFLHWYHHITVLLYSWYSYKDMVA 161

  Fly   151 GGVAFPQCLLNTAVHVIMYAYYYLSSISKEVQRSLWWKKYITIAQLVQFAIILLHCTIT------ 209
            ||..|  ..:|..||.:||:||.|.:....|.|.  :...||::|:.|   :::.|.:.      
 Frog   162 GGGWF--MTMNYGVHAVMYSYYALRAAGFRVSRK--FAMLITLSQITQ---MIIGCVVNYLVFSW 219

  Fly   210 LAQPNC------AVNRPLTYGCGSLSAFFAVIFSQFYYHNYIKPGKKSAK 253
            :.|..|      .|...:.|    ||.|  |:|..|::..||...:|::|
 Frog   220 MQQGQCPSHVQNIVWSSIMY----LSYF--VLFCHFFFEAYITKTRKASK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eloFNP_649956.1 ELO 11..252 CDD:279492 60/242 (25%)
elovl6NP_001017257.2 ELO 25..262 CDD:366492 60/242 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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