DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eloF and elovl2

DIOPT Version :10

Sequence 1:NP_649956.1 Gene:eloF / 41211 FlyBaseID:FBgn0037762 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001016159.1 Gene:elovl2 / 548913 XenbaseID:XB-GENE-489753 Length:296 Species:Xenopus tropicalis


Alignment Length:269 Identity:89/269 - (33%)
Similarity:136/269 - (50%) Gaps:40/269 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFAPIDPVKIPVVSNPWITMG----TLIGYLLFVLK--LGPKIMEHRKPFHLNGVIRIYNIFQIL 59
            :|.|.|     ..:..|:.:.    ||...||:.|.  ||.|.|::|..|.|.|.:.:||:    
 Frog    18 LFGPRD-----TRTRGWLMLDSYLPTLFLTLLYFLSIWLGTKYMQNRPAFSLRGHLIVYNL---- 73

  Fly    60 YNGLILVLGVHFLFVL------KAYQISCIVSLPMDHKYKDRERLICTLYLVNKFVDLVETIFFV 118
               ::.:|.::.|..|      ..|.:.| .:|....|...|...:...|..:|.::.::|||||
 Frog    74 ---VVTLLSLYMLIELILSTWEGGYNLQC-QNLDSAGKADVRVAKVLWWYYFSKAIEFMDTIFFV 134

  Fly   119 LRKKDRQISFLHVFHHFAMAFFGYLYYCFHGY--GGVAFPQCLLNTAVHVIMYAYYYLSSISKEV 181
            ||||:.||:||||:||.:|  |. :::|...:  .|.:|....||:.:||:||:||.||.| ..:
 Frog   135 LRKKNSQITFLHVYHHASM--FN-IWWCVLNWIPCGQSFFGPTLNSFIHVLMYSYYGLSVI-PSM 195

  Fly   182 QRSLWWKKYITIAQLVQFAIILLHCTITLAQPNCAVNRPLTYGC----GSLSAFFAVIFSQFYYH 242
            .:.||||:|:|.||||||.:.:.| |::.|...|.    ..:||    .|..|...::|..||..
 Frog   196 HKYLWWKRYLTQAQLVQFLLTITH-TLSAAVKPCG----FPFGCLMFQASYMATLVILFVNFYLK 255

  Fly   243 NYIKPGKKS 251
            .|.|...||
 Frog   256 TYKKRPSKS 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eloFNP_649956.1 ELO 11..252 CDD:460083 86/259 (33%)
elovl2NP_001016159.1 ELO 49..263 CDD:460083 78/230 (34%)

Return to query results.
Submit another query.