DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eloF and elovl4a

DIOPT Version :10

Sequence 1:NP_649956.1 Gene:eloF / 41211 FlyBaseID:FBgn0037762 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_957090.1 Gene:elovl4a / 393769 ZFINID:ZDB-GENE-040426-1767 Length:309 Species:Danio rerio


Alignment Length:262 Identity:90/262 - (34%)
Similarity:137/262 - (52%) Gaps:36/262 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIPVVSNPWITMGTLIGYLLFVLKLGPKIMEHRKPFHLNGVIRIYNIFQILYNGLILVLGVHFLF 73
            |.|::.:|..|:.....|||| |.||||.|:.|:||.|...:.|||...::.|..|.   .....
Zfish    28 KWPLMDSPLPTLAISSSYLLF-LWLGPKYMQGREPFQLRKTLIIYNFSMVILNFFIF---KELFL 88

  Fly    74 VLKAYQISCIVSLPMDHKYKDRE-RLICTL--YLVNKFVDLVETIFFVLRKKDRQISFLHVFHH- 134
            ..:|...|.|.. |:|:.....| |:...|  |.::|.|:.::|:||:||||..|||||||:|| 
Zfish    89 AARAANYSYICQ-PVDYSDDPNEVRVAAALWWYFISKGVEYLDTVFFILRKKFNQISFLHVYHHC 152

  Fly   135 --FAMAFFGYLYYCFHGYGGVAFPQCLLNTAVHVIMYAYYYLSSISKEVQRSLWWKKYITIAQLV 197
              |.:.:.|..:..    ||.:|....:|.|:||:||.||.|::...::|:.||||||:||.|:|
Zfish   153 TMFTLWWIGIKWVA----GGQSFFGAHMNAAIHVLMYLYYGLAAFGPKIQKFLWWKKYLTIIQMV 213

  Fly   198 QFAIILLHCTITLAQ----PN----CAVNRPLTYGCGSLSAFFAVIFSQFYYHNYIKPGKKSAKQ 254
            ||.:.:.|..::|..    |.    |.:...||         |.::|..|||..|    ::..::
Zfish   214 QFHVTIGHTALSLYSDCPFPKWMHWCLIGYALT---------FIILFGNFYYQTY----RRQPRR 265

  Fly   255 NK 256
            :|
Zfish   266 DK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eloFNP_649956.1 ELO 11..252 CDD:460083 88/254 (35%)
elovl4aNP_957090.1 ELO 30..267 CDD:460083 88/258 (34%)

Return to query results.
Submit another query.