DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eloF and elo-3

DIOPT Version :10

Sequence 1:NP_649956.1 Gene:eloF / 41211 FlyBaseID:FBgn0037762 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001367447.1 Gene:elo-3 / 183948 WormBaseID:WBGene00001241 Length:320 Species:Caenorhabditis elegans


Alignment Length:268 Identity:69/268 - (25%)
Similarity:118/268 - (44%) Gaps:47/268 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VSNPWITMGTLIGYLLFVLKLGPKIMEHRKPFHLNGVIRIYNIFQILYNGL-ILVLGVHFLFVLK 76
            :.|.|....|.....:.|:..|.||||..|||.|:..:.::|.|..:::.| .|.:...|::...
 Worm    34 MQNHWYQSITASVVYVAVIFTGKKIMEKYKPFQLDTPLFVWNSFLAIFSILGFLRMTPEFVWSWS 98

  Fly    77 AYQISCIVSLPMDHKYKDRERLIC-------------TLYLVNKFVDLVETIFFVLRKKDRQISF 128
            |...|        .||.     ||             ..:.::|..:|::|||.||||  |.:.|
 Worm    99 AEGNS--------FKYS-----ICHSSYAQGVTGFWTEQFAMSKLFELIDTIFIVLRK--RPLIF 148

  Fly   129 LHVFHHFAMAFFGYLYYCFHGYGGVAFPQCLLNTAVHVIMYAYYYLSSISKEVQRSLWWKKYITI 193
            ||.:||..:..:.:..|..|...|..|  ..:|..||.:||:||.|.|:...:.:.:  ...:|.
 Worm   149 LHWYHHVTVMIYTWHAYKDHTASGRWF--IWMNYGVHALMYSYYALRSLKFRLPKQM--AMVVTT 209

  Fly   194 AQLVQFAI-ILLHCTITLAQPN---CAV---NRPLTYGCGSLSAFFA--VIFSQFYYHNYIKPGK 249
            .||.|..: :::..|:...:.:   |..   |..|.:|     .:|.  ::|:.|:||.|:|...
 Worm   210 LQLAQMVMGVIIGVTVYRIKSSGEYCQQTWDNLGLCFG-----VYFTYFLLFANFFYHAYVKKNN 269

  Fly   250 KSAKQNKN 257
            :..:..|:
 Worm   270 RYTEVKKD 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eloFNP_649956.1 ELO 11..252 CDD:460083 68/261 (26%)
elo-3NP_001367447.1 ELO 33..270 CDD:460083 68/259 (26%)

Return to query results.
Submit another query.