DRSC/TRiP Functional Genomics Resources

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Protein Alignment eloF and elo-4

DIOPT Version :9

Sequence 1:NP_649956.1 Gene:eloF / 41211 FlyBaseID:FBgn0037762 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_499056.1 Gene:elo-4 / 183367 WormBaseID:WBGene00001242 Length:291 Species:Caenorhabditis elegans


Alignment Length:252 Identity:68/252 - (26%)
Similarity:109/252 - (43%) Gaps:37/252 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IGYLLFVL-KLGPKIMEHRKPFHLNGVIRIYNIFQILYNGLILVLGVHFLFVLKAYQISCIVSLP 87
            |..|.|:| |:..|.||:||||.|.     |.:  ||:||.:....:  :..|: :.|..:.||.
 Worm    58 ISVLYFILIKVIQKFMENRKPFTLK-----YPL--ILWNGALAAFSI--IATLR-FSIDPLRSLY 112

  Fly    88 MDHKYK---------DRERLICTLYLVNKFVDLVETIFFVLRKKDRQISFLHVFHHFAMAFFGYL 143
            .:..||         |........:.::|.|:|.:|:|.:|||  |.:.|||.:||.|:..:...
 Worm   113 AEGFYKTLCYSCNPTDVAAFWSFAFALSKIVELGDTMFIILRK--RPLIFLHYYHHAAVLIYTVH 175

  Fly   144 YYCFHGYGGVAFPQCLLNTAVHVIMYAYYYLSSISKEVQRSLWWKKYITIAQLVQ--------FA 200
            ....|...|..:  .|:|...|.:||.||.:|::...:.:  |....:|..|..|        :.
 Worm   176 SGAEHTAAGRFY--ILMNYFAHSLMYTYYTVSAMGYRLPK--WVSMTVTTVQTTQMLAGVGITWM 236

  Fly   201 IILLHCTITLAQPNCAVNRPLTYGCGSLSAFFAVIFSQFYYHNYIKPGKKSAKQNKN 257
            :..:.....|.......|..|.:   .:...||::|.||:...||....|.:|..||
 Worm   237 VYKVKTEYKLPCQQSVANLYLAF---VIYVTFAILFIQFFVKAYIIKSSKKSKSVKN 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eloFNP_649956.1 ELO 11..252 CDD:279492 65/245 (27%)
elo-4NP_499056.1 ELO 48..278 CDD:279492 62/238 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3071
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100813
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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