DRSC/TRiP Functional Genomics Resources

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Protein Alignment eloF and elo-1

DIOPT Version :9

Sequence 1:NP_649956.1 Gene:eloF / 41211 FlyBaseID:FBgn0037762 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_501689.1 Gene:elo-1 / 177787 WormBaseID:WBGene00001239 Length:288 Species:Caenorhabditis elegans


Alignment Length:282 Identity:76/282 - (26%)
Similarity:115/282 - (40%) Gaps:82/282 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ITMGTLIGYLLFVLKLGPK-IMEHRKPFHLNGVIRIYNIFQILYNGLILVLGVHFLFVLKAYQIS 81
            :|:...|.|::.|  .|.| .|.:|:||.|...:.|:|                  |:|.|:.|:
 Worm    46 VTIQASILYMVVV--FGTKWFMRNRQPFQLTIPLNIWN------------------FILAAFSIA 90

  Fly    82 CIVSLPMDH-----------KY-------KDRERLICTLYLVNKFVDLVETIFFVLRKKDRQISF 128
            ..|.:..:.           .|       |........|::.:|..:||:|||.||||  |.:.|
 Worm    91 GAVKMTPEFFGTIANKGIVASYCKVFDFTKGENGYWVWLFMASKLFELVDTIFLVLRK--RPLMF 153

  Fly   129 LHVFHHFAMAFFGYLYYC------FHGYGGVAFPQCLLNTAVHVIMYAYYYLSSISKEVQRSLWW 187
            ||.:||.....  |.:|.      |:.||      ..||..||..||:||:|.|:...|...:  
 Worm   154 LHWYHHILTMI--YAWYSHPLTPGFNRYG------IYLNFVVHAFMYSYYFLRSMKIRVPGFI-- 208

  Fly   188 KKYITIAQLVQFAI---------ILLHCTITLAQPNCAVNRPLTYGCGSLSAF----FAVIFSQF 239
            .:.||..|:|||.|         .|:|.|    ..||.. .|..:   .|:.|    :..:|..|
 Worm   209 AQAITSLQIVQFIISCAVLAHLGYLMHFT----NANCDF-EPSVF---KLAVFMDTTYLALFVNF 265

  Fly   240 YYHNYI-KPGK---KSAKQNKN 257
            :..:|: :.||   |:..:.||
 Worm   266 FLQSYVLRGGKDKYKAVPKKKN 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eloFNP_649956.1 ELO 11..252 CDD:279492 74/275 (27%)
elo-1NP_501689.1 ELO 39..278 CDD:279492 73/271 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100813
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R389
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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