DRSC/TRiP Functional Genomics Resources

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Protein Alignment eloF and elo-1

DIOPT Version :10

Sequence 1:NP_649956.1 Gene:eloF / 41211 FlyBaseID:FBgn0037762 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_501689.1 Gene:elo-1 / 177787 WormBaseID:WBGene00001239 Length:288 Species:Caenorhabditis elegans


Alignment Length:282 Identity:76/282 - (26%)
Similarity:115/282 - (40%) Gaps:82/282 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ITMGTLIGYLLFVLKLGPK-IMEHRKPFHLNGVIRIYNIFQILYNGLILVLGVHFLFVLKAYQIS 81
            :|:...|.|::.|  .|.| .|.:|:||.|...:.|:|                  |:|.|:.|:
 Worm    46 VTIQASILYMVVV--FGTKWFMRNRQPFQLTIPLNIWN------------------FILAAFSIA 90

  Fly    82 CIVSLPMDH-----------KY-------KDRERLICTLYLVNKFVDLVETIFFVLRKKDRQISF 128
            ..|.:..:.           .|       |........|::.:|..:||:|||.||||  |.:.|
 Worm    91 GAVKMTPEFFGTIANKGIVASYCKVFDFTKGENGYWVWLFMASKLFELVDTIFLVLRK--RPLMF 153

  Fly   129 LHVFHHFAMAFFGYLYYC------FHGYGGVAFPQCLLNTAVHVIMYAYYYLSSISKEVQRSLWW 187
            ||.:||.....  |.:|.      |:.||      ..||..||..||:||:|.|:...|...:  
 Worm   154 LHWYHHILTMI--YAWYSHPLTPGFNRYG------IYLNFVVHAFMYSYYFLRSMKIRVPGFI-- 208

  Fly   188 KKYITIAQLVQFAI---------ILLHCTITLAQPNCAVNRPLTYGCGSLSAF----FAVIFSQF 239
            .:.||..|:|||.|         .|:|.|    ..||.. .|..:   .|:.|    :..:|..|
 Worm   209 AQAITSLQIVQFIISCAVLAHLGYLMHFT----NANCDF-EPSVF---KLAVFMDTTYLALFVNF 265

  Fly   240 YYHNYI-KPGK---KSAKQNKN 257
            :..:|: :.||   |:..:.||
 Worm   266 FLQSYVLRGGKDKYKAVPKKKN 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eloFNP_649956.1 ELO 11..252 CDD:460083 74/275 (27%)
elo-1NP_501689.1 ELO 39..278 CDD:460083 73/271 (27%)

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