DRSC/TRiP Functional Genomics Resources

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Protein Alignment eloF and elovl3

DIOPT Version :9

Sequence 1:NP_649956.1 Gene:eloF / 41211 FlyBaseID:FBgn0037762 Length:257 Species:Drosophila melanogaster
Sequence 2:XP_002935809.1 Gene:elovl3 / 100497108 XenbaseID:XB-GENE-977704 Length:270 Species:Xenopus tropicalis


Alignment Length:286 Identity:69/286 - (24%)
Similarity:115/286 - (40%) Gaps:65/286 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 MGTLIGYLLFVLKLGPKIMEHRKPFHLNGVIRIYN-------IFQILYNGLI------------- 64
            ||.|.|:.|.|:.|.....|.|  |...|.|:...       .|.:||..||             
 Frog     1 MGELDGHNLSVVLLQEYDFERR--FDDQGAIQWMQENWSKSFFFSLLYAALIFGGQRMMKERRRF 63

  Fly    65 -----LVLGVHFLFVLKAYQI-----------SCIVSLPMDHKYKDR-------ERLICTLYLVN 106
                 |||   :.|.|..:.|           :.:::........||       .:.....::::
 Frog    64 ELRRPLVL---WSFTLAVFSIIGAVRTGWFMGNILITNGFKQSVCDRAFYSGPVSKFWAYAFVLS 125

  Fly   107 KFVDLVETIFFVLRKKDRQISFLHVFHHFAMAFFGYLYYCFHGYGGVAFPQCLLNTAVHVIMYAY 171
            |..:|.:|:|.||||  :::.|||.:||..:..:.:..|.....||..|  ..:|..||..||:|
 Frog   126 KVPELGDTLFIVLRK--QKLIFLHWYHHITVLLYTWYTYKDTVAGGGWF--MTMNYTVHAFMYSY 186

  Fly   172 YYLSSISKEVQRSLWWKKYITIAQLVQFAIILLHCTITLA---QPNC-AVNRPLTYGCGSLSAFF 232
            |.|.:....|.|..  ..:||..|::|..:.::...:..:   ..:| :....:.:.|....::|
 Frog   187 YTLRAAGIRVPRPC--AMFITFTQILQMVMGIVVNALVYSWRQDGSCLSTTENIFWSCLMYFSYF 249

  Fly   233 AVIFSQFYYHNYIK-PGKKSAKQNKN 257
             ::|..|:|..|:| |.|     |||
 Frog   250 -ILFCSFFYKAYLKYPIK-----NKN 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eloFNP_649956.1 ELO 11..252 CDD:279492 66/279 (24%)
elovl3XP_002935809.1 ELO 31..262 CDD:366492 51/240 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1094172at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X54
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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